Aliases for ENSG00000225177 Gene

Aliases for ENSG00000225177 Gene

  • Novel Transcript 5
  • HSALNG0053831 169
  • Lnc-CCDC28A-1 170
  • NONHSAG044972 94
  • AL590617.2 5

External Ids for ENSG00000225177 Gene

Previous GeneCards Identifiers for ENSG00000225177 Gene

  • GC06P139013

Summaries for ENSG00000225177 Gene

GeneCards Summary for ENSG00000225177 Gene

ENSG00000225177 is an Uncategorized gene.

Additional gene information for ENSG00000225177 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000225177 Gene

Genomics for ENSG00000225177 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000225177 Gene

Promoters and enhancers for ENSG00000225177 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH06J138689 Promoter/Enhancer 1.8 Ensembl ENCODE CraniofacialAtlas dbSUPER 762.7 -0.7 -652 4.6 ZNF785 ZNF24 CTCF POLR2A CREB1 ZNF362 NFYC L3MBTL2 RAD21 ZNF148 ENSG00000225177 FLJ46906 NHSL1 lnc-NHSL1-4 lnc-NHSL1-2
GH06J138535 Promoter/Enhancer 1.8 FANTOM5 Ensembl ENCODE CraniofacialAtlas dbSUPER 15 -150.8 -150824 12.8 LCORL MLX RBPJ NR2F1 NR2F6 ATF1 CREB1 MIXL1 ZNF362 RELA NHSL1 ENSG00000225177 PERP HEBP2 PBOV1 piR-31937-222 RF00017-5806
GH06J138591 Enhancer 1 ENCODE 23.1 -98.4 -98358 4.8 ZNF24 SP1 RBPJ POLR2A NR2F6 MIXL1 ETV6 RELA RAD21 POU5F1 ENSG00000225177 NHSL1 CCDC28A PERP RF00017-5807 RF00017-5806 lnc-NHSL1-4
GH06J138496 Promoter/Enhancer 1.9 FANTOM5 Ensembl ENCODE dbSUPER 10.3 -185.9 -185920 20.3 CTCF LCORL FOXA1 MLX RBPJ NR2F6 ATF1 CREB1 MIXL1 ZNF362 NHSL1 PERP ENSG00000225177 REPS1 piR-31937-222 ENSG00000274594
GH06J138722 Enhancer 1 Ensembl ENCODE 17.7 +31.0 30953 2.6 ZNF362 RAD21 TEAD4 CTCF SP1 MAFK ZNF687 PRDM1 CREM IKZF1 ENSG00000225177 NHSL1 lnc-CCDC28A-7 lnc-NHSL1-2
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000225177 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000225177 Gene

Genomic Locations for ENSG00000225177 Gene
chr6:138,692,548-138,697,288
(GRCh38/hg38)
Size:
4,741 bases
Orientation:
Plus strand

Genomic View for ENSG00000225177 Gene

Genes around ENSG00000225177 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000225177 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000225177 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000225177 Gene

Proteins for ENSG00000225177 Gene

Post-translational modifications for ENSG00000225177 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000225177 Gene

Domains & Families for ENSG00000225177 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000225177 Gene

Function for ENSG00000225177 Gene

Phenotypes From GWAS Catalog for ENSG00000225177 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000225177 Gene

Localization for ENSG00000225177 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000225177 Gene

Pathways & Interactions for ENSG00000225177 Gene

PathCards logo

SuperPathways for ENSG00000225177 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ENSG00000225177 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ENSG00000225177 Gene

Drugs & Compounds for ENSG00000225177 Gene

No Compound Related Data Available

Transcripts for ENSG00000225177 Gene

mRNA/cDNA for ENSG00000225177 Gene

(5) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
(12) RNACentral transcripts :
(6) LncBook transcripts :
(10) LNCipedia transcripts :
(3) NONCODE transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000225177 Gene

No ASD Table

Relevant External Links for ENSG00000225177 Gene

GeneLoc Exon Structure for
ENSG00000225177

Expression for ENSG00000225177 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000225177 Gene

Orthologs for ENSG00000225177 Gene

Evolution for ENSG00000225177 Gene

ENSEMBL:
Gene Tree for ENSG00000225177 (if available)
TreeFam:
Gene Tree for ENSG00000225177 (if available)

No data available for Orthologs for ENSG00000225177 Gene

Paralogs for ENSG00000225177 Gene

No data available for Paralogs for ENSG00000225177 Gene

Variants for ENSG00000225177 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000225177 Gene

Disorders for ENSG00000225177 Gene

No disorders were found for ENSG00000225177 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000225177 Gene

Publications for ENSG00000225177 Gene

No publications were found for ENSG00000225177 Gene.

No data available for External Links for ENSG00000225177 Gene

Products for ENSG00000225177 Gene

Sources for ENSG00000225177 Gene