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Aliases for ENSG00000225172 Gene

Quality Score for this RNA gene is

13

Aliases for ENSG00000225172 Gene

  • Novel Transcript 5
  • AC096631.1 5

External Ids for ENSG00000225172 Gene

Previous GeneCards Identifiers for ENSG00000225172 Gene

  • GC01P198952

Summaries for ENSG00000225172 Gene

GeneCards Summary for ENSG00000225172 Gene

ENSG00000225172 is an RNA Gene.

Additional gene information for ENSG00000225172 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ENSG00000225172 Gene

Genomics for ENSG00000225172 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000225172 Gene

Promoters and enhancers for ENSG00000225172 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J198980 Enhancer 0.2 dbSUPER 600.7 -1.3 -1288 3.7 ENSG00000225172 ATP6V1G3 LOC105371679 GC01P198970
GH01J198929 Promoter/Enhancer 2 FANTOM5 Ensembl ENCODE dbSUPER 13.7 -50.8 -50753 11.5 SP1 ZNF384 ZNF687 ZSCAN21 FOS MAFK YY1 SP7 POLR2A KLF14 ENSG00000225172 PTPRC MIR181A1HG GC01P198915
GH01J198879 Enhancer 1.6 FANTOM5 Ensembl ENCODE dbSUPER 13.4 -102.2 -102210 3.4 TRIM24 SP7 PRDM1 ZNF404 MZF1 ZNF680 ZNF560 ZNF704 ZNF547 FOSL2 ENSG00000225172 MIR181A1 MIR181B1 PTPRC GC01P198890 GC01P198860 MIR181A1HG
GH01J198972 Enhancer 1.1 Ensembl ENCODE dbSUPER 13.8 -12.2 -12220 1.4 MAFK SP7 SP1 FOSL2 CREB1 CEBPG CTBP1 CEBPB JUN NFE2 GC01P198970 ENSG00000225172 LOC105371679
GH01J198888 Enhancer 1.2 Ensembl ENCODE dbSUPER 13 -92.0 -91984 5.9 MAFK PRDM1 FOSL2 RFX1 ZEB2 POLR2A TCF7L2 ZNF792 ZNF316 CEBPB GC01P198890 ENSG00000225172 MIR181A1 MIR181B1 GC01P198909 MIR181A1HG
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000225172 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000225172 Gene

Genomic Locations for ENSG00000225172 Gene
chr1:198,983,321-198,985,400
(GRCh38/hg38)
Size:
2,080 bases
Orientation:
Plus strand
chr1:198,952,450-198,954,529
(GRCh37/hg19)
Size:
2,080 bases
Orientation:
Plus strand

Genomic View for ENSG00000225172 Gene

Genes around ENSG00000225172 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000225172 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000225172 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000225172 Gene

Proteins for ENSG00000225172 Gene

Post-translational modifications for ENSG00000225172 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000225172 Gene

Domains & Families for ENSG00000225172 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ENSG00000225172 Gene

Function for ENSG00000225172 Gene

Phenotypes From GWAS Catalog for ENSG00000225172 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000225172 Gene

Localization for ENSG00000225172 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000225172 Gene

Pathways & Interactions for ENSG00000225172 Gene

PathCards logo

SuperPathways for ENSG00000225172 Gene

No Data Available

Interacting Proteins for ENSG00000225172 Gene

Gene Ontology (GO) - Biological Process for ENSG00000225172 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ENSG00000225172 Gene

Drugs & Compounds for ENSG00000225172 Gene

No Compound Related Data Available

Transcripts for ENSG00000225172 Gene

mRNA/cDNA for ENSG00000225172 Gene

(2) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
(2) RNA Central transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000225172 Gene

No ASD Table

Relevant External Links for ENSG00000225172 Gene

GeneLoc Exon Structure for
ENSG00000225172

Expression for ENSG00000225172 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ENSG00000225172 Gene

mRNA differential expression in normal tissues according to GTEx for ENSG00000225172 Gene

This gene is overexpressed in Testis (x17.2), Brain - Nucleus accumbens (basal ganglia) (x6.1), and Brain - Putamen (basal ganglia) (x4.7).
genes like me logo Genes that share expression patterns with ENSG00000225172: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000225172 Gene

Orthologs for ENSG00000225172 Gene

Evolution for ENSG00000225172 Gene

ENSEMBL:
Gene Tree for ENSG00000225172 (if available)
TreeFam:
Gene Tree for ENSG00000225172 (if available)

No data available for Orthologs for ENSG00000225172 Gene

Paralogs for ENSG00000225172 Gene

No data available for Paralogs for ENSG00000225172 Gene

Variants for ENSG00000225172 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000225172 Gene

Disorders for ENSG00000225172 Gene

No disorders were found for ENSG00000225172 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000225172 Gene

Publications for ENSG00000225172 Gene

No publications were found for ENSG00000225172 Gene.

No data available for External Links for ENSG00000225172 Gene

Products for ENSG00000225172 Gene

Sources for ENSG00000225172 Gene

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