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Aliases for ENSG00000225142 Gene

Subcategory (RNA class) for ENSG00000225142 Gene

lncRNA

Aliases for ENSG00000225142 Gene

  • Ribosomal Protein L21 (RPL21) Pseudogene 5
  • AC114495.1 5

External Ids for ENSG00000225142 Gene

ORGUL Members for ENSG00000225142 Gene

Previous GeneCards Identifiers for ENSG00000225142 Gene

  • GC01M031580

Summaries for ENSG00000225142 Gene

GeneCards Summary for ENSG00000225142 Gene

ENSG00000225142 is a Pseudogene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000225142 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ENSG00000225142 Gene

Genomics for ENSG00000225142 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000225142 Gene

Promoters and enhancers for ENSG00000225142 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J031109 Enhancer 1 Ensembl ENCODE 600.7 -0.9 -872 7.4 CEBPG TRIM24 SP5 PRDM1 ZNF644 SMARCA4 KAT8 PKNOX1 DPF2 ZNF512 ENSG00000225142 RPL21P22 COL16A1 GC01M031217
GH01J031098 Enhancer 1.1 Ensembl ENCODE 0.4 +8.4 8422 3.2 ZKSCAN8 ZNF148 GTF2F1 BACH1 ZNF24 SP1 HNF1A PPARG SP5 PRDM1 SELENOWP1 ENSG00000225142
GH01J031101 Enhancer 0.6 ENCODE 0.4 +5.9 5860 1.6 ELF3 ZNF512 SP1 ZNF341 GABPA CEBPB OSR2 NR2F2 USF2 BCOR SNRNP40 ENSG00000229447 KHDRBS1 ENSG00000225142 SELENOWP1
GH01J031095 Enhancer 0.4 Ensembl 0.4 +12.7 12723 0.2 POLR2A JUND SELENOWP1 ENSG00000225142
GH01J031097 Enhancer 0.2 Ensembl 0.4 +11.0 11022 0.4 SELENOWP1 ENSG00000225142
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000225142 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000225142 Gene

Genomic Locations for ENSG00000225142 Gene
chr1:31,108,188-31,108,623
(GRCh38/hg38)
Size:
436 bases
Orientation:
Minus strand

Genomic View for ENSG00000225142 Gene

Genes around ENSG00000225142 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000225142 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000225142 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000225142 Gene

Proteins for ENSG00000225142 Gene

Post-translational modifications for ENSG00000225142 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000225142 Gene

Domains & Families for ENSG00000225142 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ENSG00000225142 Gene

Function for ENSG00000225142 Gene

Phenotypes From GWAS Catalog for ENSG00000225142 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000225142 Gene

Localization for ENSG00000225142 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000225142 Gene

Pathways & Interactions for ENSG00000225142 Gene

PathCards logo

SuperPathways for ENSG00000225142 Gene

No Data Available

Interacting Proteins for ENSG00000225142 Gene

Gene Ontology (GO) - Biological Process for ENSG00000225142 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ENSG00000225142 Gene

Drugs & Compounds for ENSG00000225142 Gene

No Compound Related Data Available

Transcripts for ENSG00000225142 Gene

mRNA/cDNA for ENSG00000225142 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000225142 Gene

No ASD Table

Relevant External Links for ENSG00000225142 Gene

GeneLoc Exon Structure for
ENSG00000225142

Expression for ENSG00000225142 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000225142 Gene

Orthologs for ENSG00000225142 Gene

Evolution for ENSG00000225142 Gene

ENSEMBL:
Gene Tree for ENSG00000225142 (if available)
TreeFam:
Gene Tree for ENSG00000225142 (if available)

No data available for Orthologs for ENSG00000225142 Gene

Paralogs for ENSG00000225142 Gene

No data available for Paralogs for ENSG00000225142 Gene

Variants for ENSG00000225142 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000225142 Gene

Disorders for ENSG00000225142 Gene

No disorders were found for ENSG00000225142 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000225142 Gene

Publications for ENSG00000225142 Gene

No publications were found for ENSG00000225142 Gene.

No data available for External Links for ENSG00000225142 Gene

Products for ENSG00000225142 Gene

Sources for ENSG00000225142 Gene

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