Aliases for ENSG00000225092 Gene

Subcategory (RNA class) for ENSG00000225092 Gene

lncRNA

Number of RNA Genes sources:

3 / 17

Aliases for ENSG00000225092 Gene

  • Novel Transcript 5
  • NONHSAG042947.2 91
  • HSALNG0047874 164
  • Lnc-RIOK1-2 165
  • AL355336.2 5

External Ids for ENSG00000225092 Gene

Summaries for ENSG00000225092 Gene

GeneCards Summary for ENSG00000225092 Gene

ENSG00000225092 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000225092 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000225092 Gene

Genomics for ENSG00000225092 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for ENSG00000225092 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH06J007180 Enhancer 0.3 Ensembl dbSUPER 600.7 -0.6 -582 1 ENSG00000225092 RREB1 ENSG00000238221 RF00017-5231 RF00017-5232 SSR1
GH06J007183 Enhancer 0.3 dbSUPER 600.7 +0.7 651 1.2 RBM22 ENSG00000225092 RREB1 ENSG00000238221 ENSG00000201483 RF00017-5232 SSR1
GH06J007388 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE CraniofacialAtlas 11.2 +207.0 207018 3.8 SP1 HNRNPL GATAD2A CTCF PRDM10 ZNF629 REST ZNF512 RFX1 LEF1 RIOK1 CAGE1 lnc-SSR1-1 ENSG00000238221 SSR1 RREB1 DSP TXNDC5 SNRNP48 ENSG00000225092
GH06J008099 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE CraniofacialAtlas 11.1 +918.5 918473 3.7 SP1 HNRNPL CREB1 PRDM10 ZNF629 IKZF1 NFKBIZ ZNF692 POLR2A NFRKB EEF1E1 EEF1E1-BLOC1S5 ENSG00000232234 RREB1 RIOK1 ENSG00000225092 RF00017-5245 BLOC1S5 MN298114-197
GH06J006849 Enhancer 1.3 FANTOM5 ENCODE dbSUPER 11.2 -332.2 -332181 2.8 ATF7 REST ZNF512 LEF1 IKZF1 JUND FOXA1 ZNF740 SP1 HDAC1 RIOK1 RREB1 SNRNP48 ENSG00000225092 F13A1 lnc-LY86-9 piR-43325-079 LY86
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000225092 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for ENSG00000225092 Gene

Genomic Locations for ENSG00000225092 Gene
chr6:7,183,083-7,185,288
(GRCh38/hg38)
Size:
2,206 bases
Orientation:
Plus strand
chr6:7,183,316-7,185,520
(GRCh37/hg19)
Size:
2,205 bases
Orientation:
Plus strand

Genomic View for ENSG00000225092 Gene

Genes around ENSG00000225092 on UCSC Golden Path with GeneCards custom track
ENSG00000225092 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
ENSG00000225092 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000225092 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000225092 Gene

Proteins for ENSG00000225092 Gene

Post-translational modifications for ENSG00000225092 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000225092 Gene

Domains & Families for ENSG00000225092 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000225092 Gene

Function for ENSG00000225092 Gene

Phenotypes From GWAS Catalog for ENSG00000225092 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000225092 Gene

Localization for ENSG00000225092 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000225092 Gene

Pathways & Interactions for ENSG00000225092 Gene

PathCards logo

SuperPathways for ENSG00000225092 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ENSG00000225092 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000225092 Gene

Drugs & Compounds for ENSG00000225092 Gene

No Compound Related Data Available

Transcripts for ENSG00000225092 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for ENSG00000225092 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS00002D00DC_9606 lncRNA 1676 4

Ensembl: ENST00000451355 (view in UCSC) ,

LncBook: HSALNT0100836,

LNCipedia: lnc-RIOK1-2:1,

NONCODE: NONHSAT107591.2,

URS00009B221F_9606 lncRNA 1676 2

LncBook: HSALNT0100837,

NONCODE: NONHSAT206739.1,

ENSG00000225092 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000225092 Gene

No ASD Table

Relevant External Links for ENSG00000225092 Gene

GeneLoc Exon Structure for
ENSG00000225092

No data available for mRNA/cDNA for ENSG00000225092 Gene

Expression for ENSG00000225092 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ENSG00000225092 Gene

genes like me logo Genes that share expression patterns with ENSG00000225092: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000225092 Gene

Orthologs for ENSG00000225092 Gene

Evolution for ENSG00000225092 Gene

ENSEMBL:
Gene Tree for ENSG00000225092 (if available)
TreeFam:
Gene Tree for ENSG00000225092 (if available)

No data available for Orthologs for ENSG00000225092 Gene

Paralogs for ENSG00000225092 Gene

No data available for Paralogs for ENSG00000225092 Gene

Variants for ENSG00000225092 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000225092 Gene

Disorders for ENSG00000225092 Gene

Additional Disease Information for ENSG00000225092

No disorders were found for ENSG00000225092 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ENSG00000225092 Gene

Publications for ENSG00000225092 Gene

No publications were found for ENSG00000225092 Gene.

No data available for Mastermind for ENSG00000225092 Gene

Products for ENSG00000225092 Gene

Sources for ENSG00000225092 Gene