Aliases for ENSG00000225011 Gene

Aliases for ENSG00000225011 Gene

  • Protein Tyrosine Phosphatase, Receptor Type, U (PTPRU) Pseudogene 5
  • AL671862.1 5

External Ids for ENSG00000225011 Gene

Previous GeneCards Identifiers for ENSG00000225011 Gene

  • GC01M029819

Summaries for ENSG00000225011 Gene

GeneCards Summary for ENSG00000225011 Gene

ENSG00000225011 is a Pseudogene.

Additional gene information for ENSG00000225011 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000225011 Gene

Genomics for ENSG00000225011 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000225011 Gene

Promoters and enhancers for ENSG00000225011 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J029501 Enhancer 0.7 Ensembl ENCODE 0.4 -5.7 -5714 4 USF1 TEAD4 ZIC2 NANOG BCL3 CHD7 EP300 SP1 POU5F1 KDM1A PTPRU ENSG00000225011 lnc-MECR-6 piR-36366-001
GH01J029471 Enhancer 0.9 Ensembl ENCODE 0.3 +25.3 25343 2.3 POLR2G TGIF2 ZSCAN9 SAP130 MAFK POLR2A MXD4 CREM DRAP1 SMAD4 lnc-PTPRU-6 ENSG00000225011 lnc-MECR-6
GH01J029453 Enhancer 0.8 Ensembl ENCODE 0.3 +43.4 43393 1.4 CTCF ZNF623 SMC3 ZNF341 NFIC ZNF263 RAD21 ZFHX2 ZNF189 MAZ lnc-PTPRU-6 lnc-MECR-6 ENSG00000225011
GH01J029474 Enhancer 0.5 ENCODE 0.4 +22.3 22303 0.8 ZNF10 MXI1 GATA3 RCOR1 REST EZH2 CHD2 GATA2 YY1 RAD21 ENSG00000225011 lnc-MECR-6 lnc-PTPRU-6
GH01J029490 Enhancer 0.3 Ensembl 0.4 +6.4 6392 0.2 CTCF RAD21 ENSG00000225011 lnc-MECR-6 lnc-PTPRU-6
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000225011 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000225011 Gene

Genomic Locations for ENSG00000225011 Gene
chr1:29,488,193-29,496,893
(GRCh38/hg38)
Size:
8,701 bases
Orientation:
Minus strand
chr1:29,814,705-29,823,405
(GRCh37/hg19)
Size:
8,701 bases
Orientation:
Minus strand

Genomic View for ENSG00000225011 Gene

Genes around ENSG00000225011 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000225011 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000225011 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000225011 Gene

Proteins for ENSG00000225011 Gene

Post-translational modifications for ENSG00000225011 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000225011 Gene

Domains & Families for ENSG00000225011 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000225011 Gene

Function for ENSG00000225011 Gene

Phenotypes From GWAS Catalog for ENSG00000225011 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000225011 Gene

Localization for ENSG00000225011 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000225011 Gene

Pathways & Interactions for ENSG00000225011 Gene

PathCards logo

SuperPathways for ENSG00000225011 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for ENSG00000225011 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000225011 Gene

Drugs & Compounds for ENSG00000225011 Gene

No Compound Related Data Available

Transcripts for ENSG00000225011 Gene

mRNA/cDNA for ENSG00000225011 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000225011 Gene

No ASD Table

Relevant External Links for ENSG00000225011 Gene

GeneLoc Exon Structure for
ENSG00000225011

Expression for ENSG00000225011 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ENSG00000225011 Gene

genes like me logo Genes that share expression patterns with ENSG00000225011: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000225011 Gene

Orthologs for ENSG00000225011 Gene

Evolution for ENSG00000225011 Gene

ENSEMBL:
Gene Tree for ENSG00000225011 (if available)
TreeFam:
Gene Tree for ENSG00000225011 (if available)

No data available for Orthologs for ENSG00000225011 Gene

Paralogs for ENSG00000225011 Gene

No data available for Paralogs for ENSG00000225011 Gene

Variants for ENSG00000225011 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000225011 Gene

Disorders for ENSG00000225011 Gene

No disorders were found for ENSG00000225011 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000225011 Gene

Publications for ENSG00000225011 Gene

No publications were found for ENSG00000225011 Gene.

No data available for Mastermind for ENSG00000225011 Gene

Products for ENSG00000225011 Gene

Sources for ENSG00000225011 Gene