Aliases for ENSG00000225007 Gene

Subcategory (RNA class) for ENSG00000225007 Gene

lncRNA

Number of RNA Genes sources:

3 / 14

Aliases for ENSG00000225007 Gene

  • Novel Transcript 5
  • NONHSAG033276 92
  • HSALNG0134035 167
  • Lnc-SEPT5-5 168
  • AC000067.1 5

External Ids for ENSG00000225007 Gene

Previous GeneCards Identifiers for ENSG00000225007 Gene

  • GC22P019654

Summaries for ENSG00000225007 Gene

GeneCards Summary for ENSG00000225007 Gene

ENSG00000225007 is an RNA Gene, and is affiliated with the lncRNA class. Diseases associated with ENSG00000225007 include Astrocytoma.

Additional gene information for ENSG00000225007 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000225007 Gene

Genomics for ENSG00000225007 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000225007 Gene

Promoters and enhancers for ENSG00000225007 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH22J019662 Enhancer 1.1 Ensembl ENCODE CraniofacialAtlas 500.7 -1.8 -1822 5.2 ZNF10 ZBTB5 ZIC2 ZNF423 TSC22D4 RUNX1 MYC HINFP MCM3 MXI1 ENSG00000225007 ENSG00000235776 DGCR11 SEPTIN5 GP1BB MED15 SCARF2 UFD1 LOC100420103
GH22J019668 Enhancer 0.4 Ensembl 500.7 +1.4 1378 0.4 MCM3 SUZ12 NR4A1 ENSG00000225007 piR-35237-002 ENSG00000235776 MED15 SCARF2 DGCR11 RF00017-3753
GH22J019660 Enhancer 0.5 Ensembl 0.4 -5.6 -5622 0.4 MCM3 TRIM25 MCM7 MCM5 RNF2 ARHGAP35 ZNF512 SMARCA5 MTA1 LOC100420103 ENSG00000235776 DGCR11 SEPTIN5 GP1BB MED15 SCARF2 UFD1 ENSG00000225007 lnc-SEPT5-4
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000225007 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000225007 Gene

Genomic Locations for ENSG00000225007 Gene
chr22:19,667,023-19,667,555
(GRCh38/hg38)
Size:
533 bases
Orientation:
Plus strand
chr22:19,654,546-19,655,078
(GRCh37/hg19)
Size:
533 bases
Orientation:
Plus strand

Genomic View for ENSG00000225007 Gene

Genes around ENSG00000225007 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000225007 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000225007 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000225007 Gene

Proteins for ENSG00000225007 Gene

Post-translational modifications for ENSG00000225007 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000225007 Gene

Domains & Families for ENSG00000225007 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000225007 Gene

Function for ENSG00000225007 Gene

Phenotypes From GWAS Catalog for ENSG00000225007 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000225007 Gene

Localization for ENSG00000225007 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000225007 Gene

Pathways & Interactions for ENSG00000225007 Gene

PathCards logo

SuperPathways for ENSG00000225007 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for ENSG00000225007 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000225007 Gene

Drugs & Compounds for ENSG00000225007 Gene

No Compound Related Data Available

Transcripts for ENSG00000225007 Gene

mRNA/cDNA for ENSG00000225007 Gene

2 RNACentral transcripts :
1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
2 NONCODE transcripts :
2 LncBook transcripts :
1 LNCipedia transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000225007 Gene

No ASD Table

Relevant External Links for ENSG00000225007 Gene

GeneLoc Exon Structure for
ENSG00000225007

Expression for ENSG00000225007 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ENSG00000225007 Gene

genes like me logo Genes that share expression patterns with ENSG00000225007: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000225007 Gene

Orthologs for ENSG00000225007 Gene

Evolution for ENSG00000225007 Gene

ENSEMBL:
Gene Tree for ENSG00000225007 (if available)
TreeFam:
Gene Tree for ENSG00000225007 (if available)

No data available for Orthologs for ENSG00000225007 Gene

Paralogs for ENSG00000225007 Gene

No data available for Paralogs for ENSG00000225007 Gene

Variants for ENSG00000225007 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000225007 Gene

Disorders for ENSG00000225007 Gene

MalaCards: The human disease database

(1) MalaCards diseases for ENSG00000225007 Gene - From: LncRNADisease

Disorder Aliases PubMed IDs
astrocytoma
  • astrocytic tumor
- elite association - COSMIC cancer census association via MalaCards
genes like me logo Genes that share disorders with ENSG00000225007: view

No data available for UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000225007 Gene

Publications for ENSG00000225007 Gene

No publications were found for ENSG00000225007 Gene.

No data available for Mastermind for ENSG00000225007 Gene

Products for ENSG00000225007 Gene

Sources for ENSG00000225007 Gene