Aliases for ENSG00000224905 Gene

Subcategory (RNA class) for ENSG00000224905 Gene

lncRNA

Number of RNA Genes sources:

3 / 14

Aliases for ENSG00000224905 Gene

  • Novel Transcript, Antisense To LIPI 5
  • HSALNG0131929 167
  • NONHSAG032383 92
  • Lnc-RBM11-2 168
  • AP001347.1 5

External Ids for ENSG00000224905 Gene

Previous GeneCards Identifiers for ENSG00000224905 Gene

  • GC21P015399

Summaries for ENSG00000224905 Gene

GeneCards Summary for ENSG00000224905 Gene

ENSG00000224905 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000224905 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000224905 Gene

Genomics for ENSG00000224905 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000224905 Gene

Promoters and enhancers for ENSG00000224905 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH21J014026 Promoter/Enhancer 1.5 Ensembl ENCODE CraniofacialAtlas 505.2 +1.1 1082 3.8 ZBTB40 SP1 FOS CTBP1 TAF9B POLR2A ZNF341 SIN3A ELK1 CREB1 ENSG00000224905 LOC105377134 ANKRD20A18P RHOT1P2 LIPI lnc-RBM11-6-001
GH21J014115 Enhancer 0.8 Ensembl ENCODE 6.6 +89.0 88960 1.2 MEF2B NBN IRF1 EBF1 IKZF1 NFATC3 HDGF TBX21 PAX5 ATF7 ENSG00000224905 piR-53177-036 piR-38352-338 ERLEC1P1 LIPI
GH21J014064 Promoter 0.8 Ensembl 5.4 +36.9 36882 1.8 ZFX HCFC1 SIN3A MYC ELK1 CTCF ELF1 SNIP1 MAZ BHLHE40 ANKRD20A18P lnc-RBM11-6-001 lnc-RBM11-6-002 ANKRD20A11P RHOT1P2 ENSG00000224905 RNA5SP488 RF00001-200
GH21J014095 Enhancer 0.4 Ensembl ENCODE 8.7 +68.0 68015 0.6 EBF1 ENSG00000224905 piR-39098-131 piR-47295-002 ERLEC1P1
GH21J014120 Enhancer 0.5 Ensembl 5.1 +94.0 93981 2.8 CTCF REST RAD21 TRIM22 SMC3 L3MBTL2 CTCFL ZNF143 ZBTB33 LIPI ANKRD20A18P ENSG00000224905 piR-53177-036 piR-38352-338 ERLEC1P1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000224905 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000224905 Gene

Genomic Locations for ENSG00000224905 Gene
chr21:14,027,419-14,144,468
(GRCh38/hg38)
Size:
117,050 bases
Orientation:
Plus strand
chr21:15,399,742-15,516,789
(GRCh37/hg19)
Size:
117,048 bases
Orientation:
Plus strand

Genomic View for ENSG00000224905 Gene

Genes around ENSG00000224905 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000224905 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000224905 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000224905 Gene

Proteins for ENSG00000224905 Gene

Post-translational modifications for ENSG00000224905 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000224905 Gene

Domains & Families for ENSG00000224905 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000224905 Gene

Function for ENSG00000224905 Gene

Phenotypes From GWAS Catalog for ENSG00000224905 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000224905 Gene

Localization for ENSG00000224905 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000224905 Gene

Pathways & Interactions for ENSG00000224905 Gene

PathCards logo

SuperPathways for ENSG00000224905 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for ENSG00000224905 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000224905 Gene

Drugs & Compounds for ENSG00000224905 Gene

No Compound Related Data Available

Transcripts for ENSG00000224905 Gene

mRNA/cDNA for ENSG00000224905 Gene

16 RNACentral transcripts :
4 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
4 NONCODE transcripts :
3 LncBook transcripts :
14 LNCipedia transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000224905 Gene

No ASD Table

Relevant External Links for ENSG00000224905 Gene

GeneLoc Exon Structure for
ENSG00000224905

Expression for ENSG00000224905 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ENSG00000224905 Gene

mRNA differential expression in normal tissues according to GTEx for ENSG00000224905 Gene

This gene is overexpressed in Colon - Sigmoid (x5.4).
genes like me logo Genes that share expression patterns with ENSG00000224905: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000224905 Gene

Orthologs for ENSG00000224905 Gene

Evolution for ENSG00000224905 Gene

ENSEMBL:
Gene Tree for ENSG00000224905 (if available)
TreeFam:
Gene Tree for ENSG00000224905 (if available)

No data available for Orthologs for ENSG00000224905 Gene

Paralogs for ENSG00000224905 Gene

No data available for Paralogs for ENSG00000224905 Gene

Variants for ENSG00000224905 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000224905 Gene

Disorders for ENSG00000224905 Gene

No disorders were found for ENSG00000224905 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000224905 Gene

Publications for ENSG00000224905 Gene

No publications were found for ENSG00000224905 Gene.

No data available for Mastermind for ENSG00000224905 Gene

Products for ENSG00000224905 Gene

Sources for ENSG00000224905 Gene