Aliases for ENSG00000224901 Gene

Subcategory (RNA class) for ENSG00000224901 Gene

lncRNA

Number of RNA Genes sources:

3 / 14

Aliases for ENSG00000224901 Gene

  • Novel Transcript 5
  • HSALNG0009461 167
  • NONHSAG003867 92
  • Lnc-C1orf53-1 168
  • AL365258.1 5

External Ids for ENSG00000224901 Gene

Previous GeneCards Identifiers for ENSG00000224901 Gene

  • GC01P197727

Summaries for ENSG00000224901 Gene

GeneCards Summary for ENSG00000224901 Gene

ENSG00000224901 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000224901 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000224901 Gene

Genomics for ENSG00000224901 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000224901 Gene

Promoters and enhancers for ENSG00000224901 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J197756 Enhancer 0.3 Ensembl 500.7 -1.0 -1018 0.6 ZNF766 ENSG00000224901 FAM204BP lnc-ZBTB41-7 lnc-DENND1B-6 DENND1B
GH01J197733 Enhancer 0.8 Ensembl ENCODE 13.1 -23.6 -23619 0.6 NCOR1 TCF7 FOXA2 SMAD4 BCL6 PRDM6 RARA KDM1A NR2F6 HMG20A ENSG00000235582 NONHSAG003865.2 RPL24P5 ENSG00000224901 DENND1B C1orf53 LHX9 piR-45874-017 lnc-DENND1B-6
GH01J197736 Enhancer 0.7 Ensembl ENCODE 13.1 -20.2 -20218 1.8 ZNF217 CTBP1 CEBPB EZH2 GATA3 FOXA1 EP300 DPF2 SMARCE1 FOS ENSG00000235582 NONHSAG003865.2 RPL24P5 ENSG00000224901 DENND1B C1orf53 LHX9 piR-30853-004 lnc-DENND1B-6
GH01J197786 Enhancer 0.6 Ensembl ENCODE 12 +30.1 30145 1.1 FOS FOXA1 MYC STAT3 ENSG00000224901 DENND1B piR-58308-026
GH01J197696 Enhancer 0.5 Ensembl 12.3 -60.9 -60851 1.1 EP300 FOS CEBPG CEBPB JUN RCOR1 JUND STAT3 KLF14 PKNOX1 ENSG00000224901 ENSG00000235582 EEF1A1P32 piR-57394-017 lnc-DENND1B-6 DENND1B
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000224901 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000224901 Gene

Genomic Locations for ENSG00000224901 Gene
chr1:197,757,319-197,761,965
(GRCh38/hg38)
Size:
4,647 bases
Orientation:
Plus strand
chr1:197,726,449-197,731,095
(GRCh37/hg19)
Size:
4,647 bases
Orientation:
Plus strand

Genomic View for ENSG00000224901 Gene

Genes around ENSG00000224901 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000224901 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000224901 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000224901 Gene

Proteins for ENSG00000224901 Gene

Post-translational modifications for ENSG00000224901 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000224901 Gene

Domains & Families for ENSG00000224901 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000224901 Gene

Function for ENSG00000224901 Gene

Phenotypes From GWAS Catalog for ENSG00000224901 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000224901 Gene

Localization for ENSG00000224901 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000224901 Gene

Pathways & Interactions for ENSG00000224901 Gene

PathCards logo

SuperPathways for ENSG00000224901 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for ENSG00000224901 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000224901 Gene

Drugs & Compounds for ENSG00000224901 Gene

No Compound Related Data Available

Transcripts for ENSG00000224901 Gene

mRNA/cDNA for ENSG00000224901 Gene

1 RNACentral transcripts :
1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
1 NONCODE transcripts :
1 LncBook transcripts :
1 LNCipedia transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000224901 Gene

No ASD Table

Relevant External Links for ENSG00000224901 Gene

GeneLoc Exon Structure for
ENSG00000224901

Expression for ENSG00000224901 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ENSG00000224901 Gene

genes like me logo Genes that share expression patterns with ENSG00000224901: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000224901 Gene

Orthologs for ENSG00000224901 Gene

Evolution for ENSG00000224901 Gene

ENSEMBL:
Gene Tree for ENSG00000224901 (if available)
TreeFam:
Gene Tree for ENSG00000224901 (if available)

No data available for Orthologs for ENSG00000224901 Gene

Paralogs for ENSG00000224901 Gene

No data available for Paralogs for ENSG00000224901 Gene

Variants for ENSG00000224901 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000224901 Gene

Disorders for ENSG00000224901 Gene

No disorders were found for ENSG00000224901 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000224901 Gene

Publications for ENSG00000224901 Gene

No publications were found for ENSG00000224901 Gene.

No data available for Mastermind for ENSG00000224901 Gene

Products for ENSG00000224901 Gene

Sources for ENSG00000224901 Gene