Aliases for ENSG00000224817 Gene

Subcategory (RNA class) for ENSG00000224817 Gene

lncRNA

Number of RNA Genes sources:

3 / 17

Aliases for ENSG00000224817 Gene

  • Novel Transcript 5
  • NONHSAG006731.2 91
  • HSALNG0080234 164
  • Lnc-FBXW4-1 165
  • AC010789.1 5

External Ids for ENSG00000224817 Gene

Previous GeneCards Identifiers for ENSG00000224817 Gene

  • GC10M103464

Summaries for ENSG00000224817 Gene

GeneCards Summary for ENSG00000224817 Gene

ENSG00000224817 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000224817 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000224817 Gene

Genomics for ENSG00000224817 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for ENSG00000224817 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH10J101725 Enhancer 0.8 Ensembl ENCODE 0.7 +4.6 4612 1.8 IKZF2 YY1 EED RUNX3 IKZF1 JUNB NR2F1 BATF EBF1 MAZ FGF8 FBXW4 POLL DPCD HPS6 ENSG00000224817 LOC105378456
GH10J101748 Enhancer 0.9 Ensembl ENCODE 0.4 -19.0 -18986 2.2 CTCF LEF1 IKZF1 HDAC1 EP300 NRF1 MGA ZNF766 HMBOX1 GATAD2A lnc-FGF8-2 ENSG00000224817 lnc-FGF8-1 LOC105378458 FGF8 FBXW4
GH10J101716 Enhancer 0.7 Ensembl ENCODE 0.4 +13.1 13084 1 RFX1 FOXA1 NFE2 ZNF316 ZNF318 MAFG CUX1 GATA3 FOS MAFF POLL FBXW4 DPCD ENSG00000224817 LOC105378456 FGF8
GH10J101709 Enhancer 0.7 Ensembl 0.4 +20.0 20024 0.6 PRDM1 SCRT2 ZBTB44 ZBTB17 SCRT1 OVOL3 ZNF189 ZNF335 ZBTB1 NR2F6 FGF8 POLL DPCD BTRC LOC105378456 FBXW4 ENSG00000224817
GH10J101703 Enhancer 0.6 Ensembl 0.3 +26.5 26524 0.4 IKZF2 PKNOX1 DPF2 RELB RUNX3 FOSL1 IKZF1 RFX5 JUNB ZNF384 LOC105378455 LOC105378456 FGF8 POLL DPCD TLX1 FBXW4 ENSG00000286489 ENSG00000224817
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000224817 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for ENSG00000224817 Gene

Genomic Locations for ENSG00000224817 Gene
chr10:101,701,714-101,730,124
(GRCh38/hg38)
Size:
28,411 bases
Orientation:
Minus strand
chr10:103,464,409-103,468,158
(GRCh37/hg19)
Size:
3,750 bases
Orientation:
Minus strand

Genomic View for ENSG00000224817 Gene

Genes around ENSG00000224817 on UCSC Golden Path with GeneCards custom track
ENSG00000224817 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
ENSG00000224817 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000224817 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000224817 Gene

Proteins for ENSG00000224817 Gene

Post-translational modifications for ENSG00000224817 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000224817 Gene

Domains & Families for ENSG00000224817 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000224817 Gene

Function for ENSG00000224817 Gene

Phenotypes From GWAS Catalog for ENSG00000224817 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000224817 Gene

Localization for ENSG00000224817 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000224817 Gene

Pathways & Interactions for ENSG00000224817 Gene

PathCards logo

SuperPathways for ENSG00000224817 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ENSG00000224817 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000224817 Gene

Drugs & Compounds for ENSG00000224817 Gene

No Compound Related Data Available

Transcripts for ENSG00000224817 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for ENSG00000224817 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS00005925DE_9606 lncRNA 291 4

Ensembl: ENST00000458489 (view in UCSC) ,

LncBook: HSALNT0167316,

LNCipedia: lnc-FBXW4-1:3,

NONCODE: NONHSAT016069.2,

URS0000EF3D3A_9606 lncRNA 856 1

Ensembl: ENST00000664847 (view in UCSC) ,

URS0000EEE79A_9606 lncRNA 824 1

Ensembl: ENST00000670664 (view in UCSC) ,

URS00008B776A_9606 lncRNA 2633 3

LncBook: HSALNT0167314,

LNCipedia: lnc-FBXW4-1:2,

NONCODE: NONHSAT016068.2,

URS00009B1DCF_9606 lncRNA 1938 2

LncBook: HSALNT0167313,

NONCODE: NONHSAT157422.1,

ENSG00000224817 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000224817 Gene

No ASD Table

Relevant External Links for ENSG00000224817 Gene

GeneLoc Exon Structure for
ENSG00000224817

No data available for mRNA/cDNA for ENSG00000224817 Gene

Expression for ENSG00000224817 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ENSG00000224817 Gene

genes like me logo Genes that share expression patterns with ENSG00000224817: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000224817 Gene

Orthologs for ENSG00000224817 Gene

Evolution for ENSG00000224817 Gene

ENSEMBL:
Gene Tree for ENSG00000224817 (if available)
TreeFam:
Gene Tree for ENSG00000224817 (if available)

No data available for Orthologs for ENSG00000224817 Gene

Paralogs for ENSG00000224817 Gene

No data available for Paralogs for ENSG00000224817 Gene

Variants for ENSG00000224817 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000224817 Gene

Disorders for ENSG00000224817 Gene

Additional Disease Information for ENSG00000224817

No disorders were found for ENSG00000224817 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ENSG00000224817 Gene

Publications for ENSG00000224817 Gene

No publications were found for ENSG00000224817 Gene.

No data available for Mastermind for ENSG00000224817 Gene

Products for ENSG00000224817 Gene

Sources for ENSG00000224817 Gene