Aliases for ENSG00000224750 Gene

Subcategory (RNA class) for ENSG00000224750 Gene

lncRNA

Number of RNA Genes sources:

3 / 17

Aliases for ENSG00000224750 Gene

  • Novel Transcript 5
  • NONHSAG006506.2 91
  • HSALNG0079622 164
  • Lnc-RPP30-6 165
  • AL391704.1 5

External Ids for ENSG00000224750 Gene

Previous GeneCards Identifiers for ENSG00000224750 Gene

  • GC10P092213

Summaries for ENSG00000224750 Gene

GeneCards Summary for ENSG00000224750 Gene

ENSG00000224750 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000224750 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000224750 Gene

Genomics for ENSG00000224750 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for ENSG00000224750 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH10J090471 Enhancer 0.6 Ensembl 0.4 +17.0 17032 0.4 ZNF692 TCF7L2 OSR2 NR2F2 WT1 ZNF189 FEZF1 RXRA PRDM6 GLIS1 ENSG00000238291 ENSG00000224750 lnc-RPP30-10 lnc-HTR7-2 LINC02653 HTR7 KIF20B
GH10J090499 Enhancer 0.5 ENCODE 0.3 +45.2 45180 0.2 RFX1 BMI1 CTBP1 ZNF217 DPF2 SMARCE1 LINC02653 lnc-HTR7-2 ENSG00000238291 ENSG00000224750 lnc-RPP30-10 HTR7 KIF20B
GH10J090484 Enhancer 0.3 Ensembl 0.3 +30.5 30532 1.4 NANOG ENSG00000238291 ENSG00000224750 lnc-RPP30-10 lnc-HTR7-2 LINC02653 HTR7 KIF20B
GH10J090461 Enhancer 0.2 Ensembl 0.4 +7.5 7532 1 ENSG00000238291 LINC02653 ENSG00000224750 lnc-RPP30-10 lnc-HTR7-2 HTR7 KIF20B
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000224750 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for ENSG00000224750 Gene

Genomic Locations for ENSG00000224750 Gene
chr10:90,454,169-90,531,117
(GRCh38/hg38)
Size:
76,949 bases
Orientation:
Plus strand
chr10:92,213,927-92,262,725
(GRCh37/hg19)
Size:
48,799 bases
Orientation:
Plus strand

Genomic View for ENSG00000224750 Gene

Genes around ENSG00000224750 on UCSC Golden Path with GeneCards custom track
ENSG00000224750 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
ENSG00000224750 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000224750 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000224750 Gene

Proteins for ENSG00000224750 Gene

Post-translational modifications for ENSG00000224750 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000224750 Gene

Domains & Families for ENSG00000224750 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000224750 Gene

Function for ENSG00000224750 Gene

Phenotypes From GWAS Catalog for ENSG00000224750 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000224750 Gene

Localization for ENSG00000224750 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000224750 Gene

Pathways & Interactions for ENSG00000224750 Gene

PathCards logo

SuperPathways for ENSG00000224750 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ENSG00000224750 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000224750 Gene

Drugs & Compounds for ENSG00000224750 Gene

No Compound Related Data Available

Transcripts for ENSG00000224750 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for ENSG00000224750 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS000060843F_9606 lncRNA 2368 4

Ensembl: ENST00000422206 (view in UCSC) ,

LncBook: HSALNT0166225,

LNCipedia: lnc-RPP30-6:2,

NONCODE: NONHSAT015592.2,

URS00005E41FB_9606 lncRNA 874 4

Ensembl: ENST00000453889 (view in UCSC) ,

LncBook: HSALNT0166228,

LNCipedia: lnc-RPP30-6:3,

NONCODE: NONHSAT015593.2,

URS0000032DC5_9606 lncRNA 462 4

Ensembl: ENST00000414903 (view in UCSC) ,

LncBook: HSALNT0166231,

LNCipedia: lnc-RPP30-6:5,

NONCODE: NONHSAT015595.2,

URS00008BD102_9606 lncRNA 784 3

LncBook: HSALNT0166229,

LNCipedia: lnc-RPP30-6:4,

NONCODE: NONHSAT015594.2,

URS00009C240C_9606 lncRNA 3930 2

LncBook: HSALNT0166226,

NONCODE: NONHSAT155862.1,

ENSG00000224750 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000224750 Gene

No ASD Table

Relevant External Links for ENSG00000224750 Gene

GeneLoc Exon Structure for
ENSG00000224750

No data available for mRNA/cDNA for ENSG00000224750 Gene

Expression for ENSG00000224750 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ENSG00000224750 Gene

genes like me logo Genes that share expression patterns with ENSG00000224750: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000224750 Gene

Orthologs for ENSG00000224750 Gene

Evolution for ENSG00000224750 Gene

ENSEMBL:
Gene Tree for ENSG00000224750 (if available)
TreeFam:
Gene Tree for ENSG00000224750 (if available)

No data available for Orthologs for ENSG00000224750 Gene

Paralogs for ENSG00000224750 Gene

No data available for Paralogs for ENSG00000224750 Gene

Variants for ENSG00000224750 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000224750 Gene

Disorders for ENSG00000224750 Gene

Additional Disease Information for ENSG00000224750

No disorders were found for ENSG00000224750 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ENSG00000224750 Gene

Publications for ENSG00000224750 Gene

No publications were found for ENSG00000224750 Gene.

No data available for Mastermind for ENSG00000224750 Gene

Products for ENSG00000224750 Gene

Sources for ENSG00000224750 Gene