Aliases for ENSG00000224733 Gene

Subcategory (RNA class) for ENSG00000224733 Gene

lncRNA

Number of RNA Genes sources:

3 / 14

Aliases for ENSG00000224733 Gene

  • Novel Transcript, Antisense To PTPRK 5
  • HSALNG0053403 167
  • NONHSAG044807 92
  • Lnc-LAMA2-3 168
  • AL034349.1 5

External Ids for ENSG00000224733 Gene

Additional External Ids for ENSG00000224733 Gene

Previous GeneCards Identifiers for ENSG00000224733 Gene

  • GC06P128821

Summaries for ENSG00000224733 Gene

GeneCards Summary for ENSG00000224733 Gene

ENSG00000224733 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000224733 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000224733 Gene

Genomics for ENSG00000224733 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000224733 Gene

Promoters and enhancers for ENSG00000224733 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH06J128498 Enhancer 1 ENCODE dbSUPER 500.7 -0.8 -763 3.4 TCF12 NCOR1 KDM6A TEAD1 ATF2 ZNF341 FOXA2 CEBPB ZBTB17 SAP130 ENSG00000224733 PTPRK lnc-THEMIS-2
GH06J128464 Enhancer 0.8 Ensembl dbSUPER 11.2 -35.4 -35427 2.6 NCOR1 TEAD1 OSR2 MYNN NR3C1 CEBPB RBM22 NR2F2 POLR2A NFIB ENSG00000224733 lnc-THEMIS-2 PTPRK
GH06J128421 Enhancer 0.8 Ensembl ENCODE 10.6 -78.2 -78195 1.7 FOXK2 TEAD1 FOXA2 SAP130 RBM22 HOMEZ KDM1A TEAD3 ARID3A SOX5 ENSG00000224733 lnc-THEMIS-1 piR-45035-161 PTPRK
GH06J128527 Enhancer 0.6 Ensembl 11.3 +27.4 27374 1 TRIM28 ATF2 CREB1 ZBTB17 CEBPB GATA3 EP300 ZNF518A HLF JUND ENSG00000224733 PTPRK lnc-PTPRK-1
GH06J128406 Enhancer 0.5 Ensembl 9.9 -93.7 -93726 0.4 CREM HOMEZ RAD21 HNF4A REST PPARG FOXA2 FOXA1 SP1 YY1 ENSG00000224733 lnc-THEMIS-1 piR-45035-161 PTPRK
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000224733 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000224733 Gene

Genomic Locations for ENSG00000224733 Gene
chr6:128,500,527-128,501,176
(GRCh38/hg38)
Size:
650 bases
Orientation:
Plus strand
chr6:128,821,672-128,822,321
(GRCh37/hg19)
Size:
650 bases
Orientation:
Plus strand

Genomic View for ENSG00000224733 Gene

Genes around ENSG00000224733 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000224733 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000224733 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000224733 Gene

Proteins for ENSG00000224733 Gene

Post-translational modifications for ENSG00000224733 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000224733 Gene

Domains & Families for ENSG00000224733 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000224733 Gene

Function for ENSG00000224733 Gene

Phenotypes From GWAS Catalog for ENSG00000224733 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000224733 Gene

Localization for ENSG00000224733 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000224733 Gene

Pathways & Interactions for ENSG00000224733 Gene

PathCards logo

SuperPathways for ENSG00000224733 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for ENSG00000224733 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000224733 Gene

Drugs & Compounds for ENSG00000224733 Gene

No Compound Related Data Available

Transcripts for ENSG00000224733 Gene

mRNA/cDNA for ENSG00000224733 Gene

1 RNACentral transcripts :
2 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
1 NONCODE transcripts :
1 LncBook transcripts :
1 LNCipedia transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000224733 Gene

No ASD Table

Relevant External Links for ENSG00000224733 Gene

GeneLoc Exon Structure for
ENSG00000224733

Expression for ENSG00000224733 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ENSG00000224733 Gene

genes like me logo Genes that share expression patterns with ENSG00000224733: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000224733 Gene

Orthologs for ENSG00000224733 Gene

Evolution for ENSG00000224733 Gene

ENSEMBL:
Gene Tree for ENSG00000224733 (if available)
TreeFam:
Gene Tree for ENSG00000224733 (if available)

No data available for Orthologs for ENSG00000224733 Gene

Paralogs for ENSG00000224733 Gene

No data available for Paralogs for ENSG00000224733 Gene

Variants for ENSG00000224733 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000224733 Gene

Disorders for ENSG00000224733 Gene

No disorders were found for ENSG00000224733 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000224733 Gene

Publications for ENSG00000224733 Gene

No publications were found for ENSG00000224733 Gene.

No data available for Mastermind for ENSG00000224733 Gene

Products for ENSG00000224733 Gene

Sources for ENSG00000224733 Gene