Aliases for ENSG00000224700 Gene

Data sources for ENSG00000224700 Gene:

Subcategory (RNA class) for ENSG00000224700 Gene

lncRNA

Aliases for ENSG00000224700 Gene

External Ids for ENSG00000224700 Gene

Previous GeneCards Identifiers for ENSG00000224700 Gene

  • GC11P131850
  • GC11M131850

Summaries for ENSG00000224700 Gene

GeneCards Summary for ENSG00000224700 Gene

ENSG00000224700 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000224700 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000224700 Gene

Genomics for ENSG00000224700 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for ENSG00000224700 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH11J131984 Enhancer 0.2 Ensembl 250.7 -0.4 -440 1.8 ENSG00000224700 ENSG00000238117 lnc-ADAMTS15-6 HSALNG0088300 NTM
GH11J131986 Enhancer 0.2 ENCODE 250.7 -1.5 -1511 0.1 ENSG00000224700 ENSG00000238117 HSALNG0088300 NTM
GH11J131981 Enhancer 0.8 Ensembl ENCODE 0.7 +2.7 2660 2.4 FEZF1 ZIC2 YY1 ATF2 GLIS1 SP1 TRIM28 KLF1 KLF10 OSR2 lnc-ADAMTS15-6 ENSG00000224700 NTM
GH11J131998 Enhancer 1.3 VISTA Ensembl ENCODE 0.4 -13.5 -13481 0.7 FEZF1 ZIC2 ZNF610 ZNF341 PRDM6 INSM2 ZNF24 ZNF488 FOXM1 GLIS1 ENSG00000224700 HSALNG0088300 NTM
GH11J132024 Enhancer 1.2 FANTOM5 Ensembl ENCODE dbSUPER 0.3 -40.8 -40840 3 IRF4 BHLHE40 BATF JUND NR2F1 JUNB IKZF1 POLR2A TBL1XR1 EED NTM HSALNG0088300 ENSG00000224700
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000224700 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for ENSG00000224700 Gene

Latest Assembly
chr11:131,980,690-131,984,661
(GRCh38/hg38)
Size:
3,972 bases
Orientation:
Minus strand

Previous Assembly
chr11:131,850,990-131,854,555
(GRCh37/hg19 by Ensembl)
Size:
3,566 bases
Orientation:
Minus strand

Genomic View for ENSG00000224700 Gene

Genes around ENSG00000224700 on UCSC Golden Path with GeneCards custom track
ENSG00000224700 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Cytogenetic band:
ENSG00000224700 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000224700 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000224700 Gene

Proteins for ENSG00000224700 Gene

Post-translational modifications for ENSG00000224700 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000224700 Gene

Domains & Families for ENSG00000224700 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000224700 Gene

Function for ENSG00000224700 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000224700 Gene

Localization for ENSG00000224700 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000224700 Gene

Pathways & Interactions for ENSG00000224700 Gene

PathCards logo

SuperPathways for ENSG00000224700 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ENSG00000224700 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000224700 Gene

Drugs & Compounds for ENSG00000224700 Gene

No Compound Related Data Available

Transcripts for ENSG00000224700 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for ENSG00000224700 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS000057F803_9606 lncRNA 577 2

Ensembl: ENST00000446631 (view in UCSC) ,

LNCipedia: lnc-OPCML-6:3,

URS00008B57F3_9606 lncRNA 912 3

LncBook: HSALNT0183666,

LNCipedia: lnc-OPCML-6:4,

NONCODE: NONHSAT025189.2,

URS00009B65A1_9606 lncRNA 303 2

LncBook: HSALNT0183667,

NONCODE: NONHSAT160929.1,

URS0001BD3ADA_9606 lncRNA 912 1

LncBook: HSALNT0183666,

URS0001BD27EF_9606 lncRNA 303 1

LncBook: HSALNT0183667,

ENSG00000224700 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000224700 Gene

No ASD Table

Relevant External Links for ENSG00000224700 Gene

GeneLoc Exon Structure for
ENSG00000224700

No data available for mRNA/cDNA for ENSG00000224700 Gene

Expression for ENSG00000224700 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ENSG00000224700 Gene

mRNA differential expression in normal tissues according to GTEx for ENSG00000224700 Gene

This gene is overexpressed in Testis (x37.5) and Brain - Cerebellum (x6.1).
genes like me logo Genes that share expression patterns with ENSG00000224700: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000224700 Gene

Orthologs for ENSG00000224700 Gene

Evolution for ENSG00000224700 Gene

ENSEMBL:
Gene Tree for ENSG00000224700 (if available)
TreeFam:
Gene Tree for ENSG00000224700 (if available)

No data available for Orthologs for ENSG00000224700 Gene

Paralogs for ENSG00000224700 Gene

No data available for Paralogs for ENSG00000224700 Gene

Variants for ENSG00000224700 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , dbSNP identifiers (rs#s) for variants without ClinVar clinical significance , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000224700 Gene

Disorders for ENSG00000224700 Gene

No disorders were found for ENSG00000224700 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000224700 Gene

Publications for ENSG00000224700 Gene

No publications were found for ENSG00000224700 Gene.

No data available for Mastermind for ENSG00000224700 Gene

Products for ENSG00000224700 Gene

Sources for ENSG00000224700 Gene