Aliases for ENSG00000224649 Gene

Subcategory (RNA class) for ENSG00000224649 Gene

lncRNA

Number of RNA Genes sources:

3 / 14

Aliases for ENSG00000224649 Gene

  • Novel Transcript, Antisense To BACH1 5
  • HSALNG0132534 167
  • NONHSAG032619 92
  • AF124730.1 5
  • Lnc-CCT8-1 168

External Ids for ENSG00000224649 Gene

Previous GeneCards Identifiers for ENSG00000224649 Gene

  • GC21M030554

Summaries for ENSG00000224649 Gene

GeneCards Summary for ENSG00000224649 Gene

ENSG00000224649 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000224649 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000224649 Gene

Genomics for ENSG00000224649 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000224649 Gene

Promoters and enhancers for ENSG00000224649 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH21J029186 Enhancer 0.8 ENCODE dbSUPER 500.7 0.0 -20 1.8 JUND FOS EP300 FOSL2 CEBPB JUN RCOR1 NFE2 MAFK RAD21 ENSG00000224649 LINC00189 MAP3K7CL
GH21J029188 Enhancer 0.3 dbSUPER 500.7 -1.6 -1576 1.1 JUND ENSG00000224649 LINC00189
GH21J029161 Enhancer 1.2 FANTOM5 ENCODE dbSUPER 18.2 +24.4 24423 3.4 CTCF ZNF639 ZNF10 REST TOE1 EP300 RAD21 SMC3 OSR2 ZNF316 BACH1 ENSG00000224649 MAP3K7CL CCT8 BACH1-IT2 BACH1-AS1 LINC00189 USP16 LOC105372767 ENSG00000201984
GH21J029341 Enhancer 1.3 Ensembl ENCODE dbSUPER 16.3 -158.0 -157955 13.9 CTCF NCOR1 JUND FOS ZNF10 EP300 ZIC2 POLR2A REST RELA RPL23P2 LTN1 ENSG00000224649 ENSG00000231125 USP16 BACH1-IT2 BACH1-AS1 RPL12P9 LINC00189 CCT8
GH21J029226 Enhancer 1.5 FANTOM5 Ensembl ENCODE dbSUPER 11.3 -44.8 -44806 15.6 ZSCAN5C SP1 EP300 POLR2A REST MEF2C RELA RUNX1 CTBP1 RAD21 BACH1 MAP3K7CL ENSG00000224649 LINC00189 CCT8 RWDD2B USP16 piR-51433 GRIK1-AS2 piR-32214-423
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000224649 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000224649 Gene

Genomic Locations for ENSG00000224649 Gene
chr21:29,182,027-29,187,795
(GRCh38/hg38)
Size:
5,769 bases
Orientation:
Minus strand
chr21:30,554,348-30,560,116
(GRCh37/hg19)
Size:
5,769 bases
Orientation:
Minus strand

Genomic View for ENSG00000224649 Gene

Genes around ENSG00000224649 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000224649 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000224649 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000224649 Gene

Proteins for ENSG00000224649 Gene

Post-translational modifications for ENSG00000224649 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000224649 Gene

Domains & Families for ENSG00000224649 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000224649 Gene

Function for ENSG00000224649 Gene

Phenotypes From GWAS Catalog for ENSG00000224649 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000224649 Gene

Localization for ENSG00000224649 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000224649 Gene

Pathways & Interactions for ENSG00000224649 Gene

PathCards logo

SuperPathways for ENSG00000224649 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for ENSG00000224649 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000224649 Gene

Drugs & Compounds for ENSG00000224649 Gene

No Compound Related Data Available

Transcripts for ENSG00000224649 Gene

mRNA/cDNA for ENSG00000224649 Gene

3 RNACentral transcripts :
1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
3 NONCODE transcripts :
3 LncBook transcripts :
1 LNCipedia transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000224649 Gene

No ASD Table

Relevant External Links for ENSG00000224649 Gene

GeneLoc Exon Structure for
ENSG00000224649

Expression for ENSG00000224649 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ENSG00000224649 Gene

genes like me logo Genes that share expression patterns with ENSG00000224649: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000224649 Gene

Orthologs for ENSG00000224649 Gene

Evolution for ENSG00000224649 Gene

ENSEMBL:
Gene Tree for ENSG00000224649 (if available)
TreeFam:
Gene Tree for ENSG00000224649 (if available)

No data available for Orthologs for ENSG00000224649 Gene

Paralogs for ENSG00000224649 Gene

No data available for Paralogs for ENSG00000224649 Gene

Variants for ENSG00000224649 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000224649 Gene

Disorders for ENSG00000224649 Gene

No disorders were found for ENSG00000224649 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000224649 Gene

Publications for ENSG00000224649 Gene

No publications were found for ENSG00000224649 Gene.

No data available for Mastermind for ENSG00000224649 Gene

Products for ENSG00000224649 Gene

Sources for ENSG00000224649 Gene