Aliases for ENSG00000224649 Gene

Subcategory (RNA class) for ENSG00000224649 Gene

lncRNA

Number of RNA Genes sources:

3 / 17

Aliases for ENSG00000224649 Gene

  • Novel Transcript, Antisense To BACH1 5
  • NONHSAG032619.2 91
  • HSALNG0132534 164
  • AF124730.2 5
  • Lnc-CCT8-1 165

External Ids for ENSG00000224649 Gene

Previous GeneCards Identifiers for ENSG00000224649 Gene

  • GC21M030554

Summaries for ENSG00000224649 Gene

GeneCards Summary for ENSG00000224649 Gene

ENSG00000224649 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000224649 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000224649 Gene

Genomics for ENSG00000224649 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for ENSG00000224649 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH21J029186 Enhancer 0.8 ENCODE dbSUPER 600.7 0.0 -19 1.8 SP1 CEBPA JUND CEBPB NFE2 FOS JUN ATF3 RCOR1 YY1 ENSG00000224649 LINC00189 MAP3K7CL BACH1
GH21J029188 Enhancer 0.3 dbSUPER 600.7 -1.6 -1575 1.1 JUND ENSG00000224649 LINC00189 BACH1 MAP3K7CL
GH21J029161 Enhancer 1.2 FANTOM5 ENCODE dbSUPER 18.2 +24.4 24424 3.4 CTCF PRDM10 ZNF629 JUND REST RAD21 ZNF600 ZNF561 ZNF639 EGR1 BACH1 ENSG00000224649 MAP3K7CL CCT8 BACH1-IT2 BACH1-AS1 LINC00189 USP16 LOC105372767 ENSG00000201984
GH21J029341 Enhancer 1.3 Ensembl ENCODE dbSUPER 16.3 -158.0 -157954 13.9 CTCF ATF7 PRDM10 ZNF629 IKZF1 ZNF692 POLR2A BACH1 FOXA1 ZNF143 LTN1 USP16 RPL23P2 ENSG00000224649 ENSG00000231125 BACH1-IT2 BACH1-AS1 RPL12P9 LINC00189 CCT8
GH21J029226 Enhancer 1.5 FANTOM5 Ensembl ENCODE dbSUPER 11.3 -44.8 -44805 15.6 SP1 ZNF512 BACH1 JUND STAT3 RELA PKNOX1 REST RAD21 TCF12 BACH1 MAP3K7CL ENSG00000224649 LINC00189 CCT8 RWDD2B USP16 piR-51433 GRIK1-AS2 piR-32214-423
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000224649 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for ENSG00000224649 Gene

Genomic Locations for ENSG00000224649 Gene
chr21:29,181,745-29,187,796
(GRCh38/hg38)
Size:
6,052 bases
Orientation:
Minus strand
chr21:30,554,348-30,560,116
(GRCh37/hg19)
Size:
5,769 bases
Orientation:
Minus strand

Genomic View for ENSG00000224649 Gene

Genes around ENSG00000224649 on UCSC Golden Path with GeneCards custom track
ENSG00000224649 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
ENSG00000224649 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000224649 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000224649 Gene

Proteins for ENSG00000224649 Gene

Post-translational modifications for ENSG00000224649 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000224649 Gene

Domains & Families for ENSG00000224649 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000224649 Gene

Function for ENSG00000224649 Gene

Phenotypes From GWAS Catalog for ENSG00000224649 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000224649 Gene

Localization for ENSG00000224649 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000224649 Gene

Pathways & Interactions for ENSG00000224649 Gene

PathCards logo

SuperPathways for ENSG00000224649 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ENSG00000224649 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000224649 Gene

Drugs & Compounds for ENSG00000224649 Gene

No Compound Related Data Available

Transcripts for ENSG00000224649 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for ENSG00000224649 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS00003A2E08_9606 lncRNA 327 4

Ensembl: ENST00000430001 (view in UCSC) ,

LncBook: HSALNT0272501,

LNCipedia: lnc-CCT8-1:1,

NONCODE: NONHSAT081627.2,

URS00009C1598_9606 lncRNA 1131 2

LncBook: HSALNT0272499,

NONCODE: NONHSAT191359.1,

URS00009BD0EF_9606 lncRNA 327 2

LncBook: HSALNT0272502,

NONCODE: NONHSAT191360.1,

ENSG00000224649 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000224649 Gene

No ASD Table

Relevant External Links for ENSG00000224649 Gene

GeneLoc Exon Structure for
ENSG00000224649

No data available for mRNA/cDNA for ENSG00000224649 Gene

Expression for ENSG00000224649 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ENSG00000224649 Gene

genes like me logo Genes that share expression patterns with ENSG00000224649: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000224649 Gene

Orthologs for ENSG00000224649 Gene

Evolution for ENSG00000224649 Gene

ENSEMBL:
Gene Tree for ENSG00000224649 (if available)
TreeFam:
Gene Tree for ENSG00000224649 (if available)

No data available for Orthologs for ENSG00000224649 Gene

Paralogs for ENSG00000224649 Gene

No data available for Paralogs for ENSG00000224649 Gene

Variants for ENSG00000224649 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000224649 Gene

Disorders for ENSG00000224649 Gene

Additional Disease Information for ENSG00000224649

No disorders were found for ENSG00000224649 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ENSG00000224649 Gene

Publications for ENSG00000224649 Gene

No publications were found for ENSG00000224649 Gene.

No data available for Mastermind for ENSG00000224649 Gene

Products for ENSG00000224649 Gene

Sources for ENSG00000224649 Gene