Aliases for ENSG00000224595 Gene

Subcategory (RNA class) for ENSG00000224595 Gene

lncRNA

Number of RNA Genes sources:

2 / 17

Aliases for ENSG00000224595 Gene

  • Novel Transcript 5
  • NONHSAG048589.2 91
  • Lnc-PPP1R3A-2 165
  • AC073626.1 5

External Ids for ENSG00000224595 Gene

Previous GeneCards Identifiers for ENSG00000224595 Gene

  • GC07M114054

Summaries for ENSG00000224595 Gene

GeneCards Summary for ENSG00000224595 Gene

ENSG00000224595 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000224595 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000224595 Gene

Genomics for ENSG00000224595 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for ENSG00000224595 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH07J114419 Promoter/Enhancer 0.9 Ensembl CraniofacialAtlas 600.7 +0.0 2 0.7 ZSCAN4 ZNF600 BCL11A FOS ZBTB17 ZNF335 ZNF146 SP3 HNF4A ZEB2 ENSG00000224595 piR-49400-086 FOXP2 lnc-MDFIC-7 MDFIC
GH07J114412 Promoter/Enhancer 2.9 VISTA UCNEbase EPDnew Ensembl ENCODE CraniofacialAtlas 0.7 +4.3 4281 7.1 GATAD2A PRDM10 ZNF629 ZNF692 FOXA1 PRDM1 ZNF776 ZSCAN4 RBFOX2 RXRB FOXP2 ENSG00000224595 piR-49400-086 lnc-MDFIC-7 MDFIC
GH07J114422 Enhancer 1 VISTA UCNEbase CraniofacialAtlas 0.7 -3.3 -3336 1.3 CTCF PRDM1 POLR2A SCRT2 ZNF189 RAD21 ZNF366 ZNF660 SP7 FOXP2 ENSG00000224595 piR-61514-178 lnc-MDFIC-7 MDFIC
GH07J114430 Enhancer 0.8 VISTA UCNEbase 0.4 -12.1 -12092 2.5 POLR2A RAD21 PRDM6 ZNF350 PKNOX1 FOXP2 ENSG00000224595 piR-61514-178 lnc-MDFIC-7 MDFIC
GH07J114425 Enhancer 0.3 UCNEbase 0.4 -5.9 -5906 0.6 ENSG00000224595 piR-61514-178 FOXP2 lnc-MDFIC-7 MDFIC
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000224595 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for ENSG00000224595 Gene

Genomic Locations for ENSG00000224595 Gene
chr7:114,414,244-114,419,876
(GRCh38/hg38)
Size:
5,633 bases
Orientation:
Minus strand
chr7:114,054,299-114,059,930
(GRCh37/hg19)
Size:
5,632 bases
Orientation:
Minus strand

Genomic View for ENSG00000224595 Gene

Genes around ENSG00000224595 on UCSC Golden Path with GeneCards custom track
ENSG00000224595 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
ENSG00000224595 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000224595 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000224595 Gene

Proteins for ENSG00000224595 Gene

Post-translational modifications for ENSG00000224595 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000224595 Gene

Domains & Families for ENSG00000224595 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000224595 Gene

Function for ENSG00000224595 Gene

Phenotypes From GWAS Catalog for ENSG00000224595 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000224595 Gene

Localization for ENSG00000224595 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000224595 Gene

Pathways & Interactions for ENSG00000224595 Gene

PathCards logo

SuperPathways for ENSG00000224595 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ENSG00000224595 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000224595 Gene

Drugs & Compounds for ENSG00000224595 Gene

No Compound Related Data Available

Transcripts for ENSG00000224595 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for ENSG00000224595 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS0000497CB1_9606 lncRNA 582 3

Ensembl: ENST00000415146 (view in UCSC) ,

LNCipedia: lnc-PPP1R3A-2:1,

NONCODE: NONHSAT122831.2,

URS00009B2676_9606 lncRNA 582 1

NONCODE: NONHSAT213860.1,

ENSG00000224595 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000224595 Gene

No ASD Table

Relevant External Links for ENSG00000224595 Gene

GeneLoc Exon Structure for
ENSG00000224595

No data available for mRNA/cDNA for ENSG00000224595 Gene

Expression for ENSG00000224595 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ENSG00000224595 Gene

genes like me logo Genes that share expression patterns with ENSG00000224595: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000224595 Gene

Orthologs for ENSG00000224595 Gene

Evolution for ENSG00000224595 Gene

ENSEMBL:
Gene Tree for ENSG00000224595 (if available)
TreeFam:
Gene Tree for ENSG00000224595 (if available)

No data available for Orthologs for ENSG00000224595 Gene

Paralogs for ENSG00000224595 Gene

No data available for Paralogs for ENSG00000224595 Gene

Variants for ENSG00000224595 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000224595 Gene

Disorders for ENSG00000224595 Gene

No disorders were found for ENSG00000224595 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000224595 Gene

Publications for ENSG00000224595 Gene

No publications were found for ENSG00000224595 Gene.

No data available for Mastermind for ENSG00000224595 Gene

Products for ENSG00000224595 Gene

Sources for ENSG00000224595 Gene