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ENSG00000224541 Gene(RNA Gene)

 

GCID:
GC21P026158
GIFtS:
7
Genes Participants
UDN Logo

Aliases for ENSG00000224541 Gene

Quality Score for this RNA gene is

13

Aliases for ENSG00000224541 Gene

  • Novel Transcript 5
  • AP001439.1 5

External Ids for ENSG00000224541 Gene

Previous GeneCards Identifiers for ENSG00000224541 Gene

  • GC21P027530

Summaries for ENSG00000224541 Gene

GeneCards Summary for ENSG00000224541 Gene

ENSG00000224541 is an RNA Gene.

Additional gene information for ENSG00000224541 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ENSG00000224541 Gene

Genomics for ENSG00000224541 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000224541 Gene

Promoters and enhancers for ENSG00000224541 Gene
GeneHancer (GH) Identifier GH Type GH
Score		 GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites		 Gene Targets
GH21J026157 Enhancer 0.7 ENCODE dbSUPER 600.7 +0.4 356 1.3 ZSCAN5C KLF4 ZNF18 BCL6 ZNF664 ENSG00000224541 APP GC21M026165
GH21J026156 Enhancer 0.2 Ensembl 600.7 -1.6 -1590 0.2 ENSG00000224541 APP GC21P025992
GH21J026098 Enhancer 1.2 Ensembl ENCODE dbSUPER 11.4 -57.8 -57793 3.8 ZKSCAN8 BACH1 SP7 TRIM24 PRDM1 ZBTB33 GTF2E2 POLR2A ZNF740 ZNF561 APP ENSG00000224541 GC21P025992
GH21J026070 Promoter/Enhancer 1.2 Ensembl ENCODE 10.4 -86.8 -86815 2.5 SP7 PRDM1 FOXA2 KLF9 ZBTB44 EED ZSCAN5C OSR2 USF1 ZBTB17 GABPA APP ENSG00000224541 ENSG00000233783 ATP5PF GC21P025992
GH21J026130 Enhancer 1 Ensembl ENCODE dbSUPER 11.7 -27.0 -26990 2.2 PRDM12 ZNF140 CEBPB SCRT2 ZNF623 ZBTB11 CEBPG ZC3H11A ZFP64 ZNF781 GABPA APP ENSG00000224541 RNU6-926P ADAMTS5 GC21P025992
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000224541 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000224541 Gene

Genomic Locations for ENSG00000224541 Gene
chr21:26,158,091-26,175,824
(GRCh38/hg38)
Size:
17,734 bases
Orientation:
Plus strand
chr21:27,530,409-27,548,142
(GRCh37/hg19)
Size:
17,734 bases
Orientation:
Plus strand

Genomic View for ENSG00000224541 Gene

Genes around ENSG00000224541 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000224541 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000224541 Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

No data available for RefSeq DNA sequence for ENSG00000224541 Gene

Proteins for ENSG00000224541 Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

Post-translational modifications for ENSG00000224541 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000224541 Gene

Domains & Families for ENSG00000224541 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ENSG00000224541 Gene

Function for ENSG00000224541 Gene

Products:

  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line

Phenotypes From GWAS Catalog for ENSG00000224541 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000224541 Gene

Localization for ENSG00000224541 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000224541 Gene

Pathways & Interactions for ENSG00000224541 Gene

GeneAnalytics - gene set analysis. Cells, Diseases, Pathways, Function and Compounds, relevant to your gene set. Powered by GeneCards
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SuperPathways for ENSG00000224541 Gene

No Data Available

Interacting Proteins for ENSG00000224541 Gene

Gene Ontology (GO) - Biological Process for ENSG00000224541 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ENSG00000224541 Gene

Drugs & Compounds for ENSG00000224541 Gene

Products:

  1. Drug
GeneAnalytics - gene set analysis. Cells, Diseases, Pathways, Function and Compounds, relevant to your gene set. Powered by GeneCards
No Compound Related Data Available

Transcripts for ENSG00000224541 Gene

Products:

  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone

mRNA/cDNA for ENSG00000224541 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
(1) RNA Central transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000224541 Gene

No ASD Table

Relevant External Links for ENSG00000224541 Gene

GeneLoc Exon Structure for
ENSG00000224541

Expression for ENSG00000224541 Gene

Products:

  1. Primer
GeneAnalytics - gene set analysis. Cells, Diseases, Pathways, Function and Compounds, relevant to your gene set. Powered by GeneCards

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ENSG00000224541 Gene

mRNA expression in normal human tissues for ENSG00000224541 Gene
mRNA expression by GTEx for ENSG00000224541 Gene

mRNA differential expression in normal tissues according to GTEx for ENSG00000224541 Gene

This gene is overexpressed in Pituitary (x4.4) and Brain - Putamen (basal ganglia) (x4.3).
genes like me logo Genes that share expression patterns with ENSG00000224541: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000224541 Gene

Orthologs for ENSG00000224541 Gene

Evolution for ENSG00000224541 Gene

ENSEMBL:
Gene Tree for ENSG00000224541 (if available)
TreeFam:
Gene Tree for ENSG00000224541 (if available)

No data available for Orthologs for ENSG00000224541 Gene

Paralogs for ENSG00000224541 Gene

No data available for Paralogs for ENSG00000224541 Gene

Variants for ENSG00000224541 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000224541 Gene

Disorders for ENSG00000224541 Gene

No disorders were found for ENSG00000224541 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000224541 Gene

Publications for ENSG00000224541 Gene

No publications were found for ENSG00000224541 Gene.

No data available for External Links for ENSG00000224541 Gene

Products for ENSG00000224541 Gene

Sources for ENSG00000224541 Gene

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