Aliases for ENSG00000224500 Gene

Subcategory (RNA class) for ENSG00000224500 Gene

lncRNA

Quality Score for this RNA gene is

14

Aliases for ENSG00000224500 Gene

  • Novel Transcript, Antisense To KCNMA1 5
  • HSALNG0079036 169
  • NONHSAG006290 94
  • Lnc-RPS24-5 170
  • AL731575.1 5

External Ids for ENSG00000224500 Gene

Previous GeneCards Identifiers for ENSG00000224500 Gene

  • GC10P079073

Summaries for ENSG00000224500 Gene

GeneCards Summary for ENSG00000224500 Gene

ENSG00000224500 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000224500 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000224500 Gene

Genomics for ENSG00000224500 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000224500 Gene

Promoters and enhancers for ENSG00000224500 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH10J077313 Enhancer 0.4 Ensembl 750.6 +0.3 259 2 MNT ZSCAN5C GATA3 ENSG00000224500 KCNMA1-AS3 AB372785-001 KCNMA1
GH10J077349 Enhancer 1.2 Ensembl ENCODE dbSUPER 10.8 +37.1 37060 3.6 SIN3A TCF7L2 SREBF1 ZBTB33 MAFK SP7 ZSCAN21 SMARCA4 EGR1 FOSL2 KCNMA1-AS3 KCNMA1 ENSG00000224500 LOC105378369
GH10J077287 Enhancer 1.1 Ensembl ENCODE 11.7 -23.6 -23640 9.4 ZBTB6 FOXA1 TCF7L2 ZNF217 RAD21 ZNF121 TEAD4 SP1 MAFK SP7 KCNMA1-AS3 KCNMA1 KCNMA1-AS2 RNU6-1266P ENSG00000224500 lnc-LRMDA-14
GH10J077385 Enhancer 1.1 FANTOM5 Ensembl ENCODE dbSUPER 10.3 +73.8 73760 3.8 PRDM1 IKZF1 ZNF512 SCRT2 SCRT1 FOS ZFHX2 GATA3 JUND JUN KCNMA1 KCNMA1-AS3 ENSG00000224500 LOC105378369
GH10J077273 Enhancer 0.8 Ensembl ENCODE 10.5 -39.6 -39640 2.6 SP7 PKNOX1 OSR2 EZH2 GATA3 ZNF366 ZNF335 JUND FEZF1 ZNF843 KCNMA1 KCNMA1-AS3 ENSG00000224500 lnc-LRMDA-14
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000224500 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000224500 Gene

Genomic Locations for ENSG00000224500 Gene
chr10:77,313,941-77,315,694
(GRCh38/hg38)
Size:
1,754 bases
Orientation:
Plus strand
chr10:79,073,699-79,075,452
(GRCh37/hg19)
Size:
1,754 bases
Orientation:
Plus strand

Genomic View for ENSG00000224500 Gene

Genes around ENSG00000224500 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000224500 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000224500 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000224500 Gene

Proteins for ENSG00000224500 Gene

Post-translational modifications for ENSG00000224500 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000224500 Gene

Domains & Families for ENSG00000224500 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000224500 Gene

Function for ENSG00000224500 Gene

Phenotypes From GWAS Catalog for ENSG00000224500 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000224500 Gene

Localization for ENSG00000224500 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000224500 Gene

Pathways & Interactions for ENSG00000224500 Gene

PathCards logo

SuperPathways for ENSG00000224500 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ENSG00000224500 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ENSG00000224500 Gene

Drugs & Compounds for ENSG00000224500 Gene

No Compound Related Data Available

Transcripts for ENSG00000224500 Gene

mRNA/cDNA for ENSG00000224500 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
(2) RNACentral transcripts :
(2) NONCODE transcripts :
(2) LncBook transcripts :
(1) LNCipedia transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000224500 Gene

No ASD Table

Relevant External Links for ENSG00000224500 Gene

GeneLoc Exon Structure for
ENSG00000224500

Expression for ENSG00000224500 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ENSG00000224500 Gene

genes like me logo Genes that share expression patterns with ENSG00000224500: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000224500 Gene

Orthologs for ENSG00000224500 Gene

Evolution for ENSG00000224500 Gene

ENSEMBL:
Gene Tree for ENSG00000224500 (if available)
TreeFam:
Gene Tree for ENSG00000224500 (if available)

No data available for Orthologs for ENSG00000224500 Gene

Paralogs for ENSG00000224500 Gene

No data available for Paralogs for ENSG00000224500 Gene

Variants for ENSG00000224500 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000224500 Gene

Disorders for ENSG00000224500 Gene

No disorders were found for ENSG00000224500 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000224500 Gene

Publications for ENSG00000224500 Gene

No publications were found for ENSG00000224500 Gene.

No data available for External Links for ENSG00000224500 Gene

Products for ENSG00000224500 Gene

Sources for ENSG00000224500 Gene