Aliases for ENSG00000224250 Gene

Subcategory (RNA class) for ENSG00000224250 Gene

lncRNA

Number of RNA Genes sources:

3 / 14

Aliases for ENSG00000224250 Gene

  • Novel Transcript 5
  • HSALNG0081161 167
  • NONHSAG007055 92
  • Lnc-TACC2-2 168
  • AC025947.1 5

External Ids for ENSG00000224250 Gene

Previous GeneCards Identifiers for ENSG00000224250 Gene

  • GC10P123495

Summaries for ENSG00000224250 Gene

GeneCards Summary for ENSG00000224250 Gene

ENSG00000224250 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000224250 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000224250 Gene

Genomics for ENSG00000224250 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000224250 Gene

Promoters and enhancers for ENSG00000224250 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH10J121734 Enhancer 0.7 ENCODE CraniofacialAtlas 500.7 -1.5 -1527 0.2 CTCF RAD21 SMC3 ZNF384 HNF4A RBM39 ZNF362 ZNF143 ENSG00000224250 RPS15AP5
GH10J121736 Enhancer 0.7 Ensembl 500.7 +0.9 898 3.2 TRIM28 HES1 GATA3 PBX2 NFE2 GABPA FOS TAL1 TCF12 RCOR1 ENSG00000224250 piR-56693-003
GH10J121667 Enhancer 1.1 Ensembl ENCODE CraniofacialAtlas 10.7 -67.6 -67595 2.3 USF1 ZIC2 ZNF423 MXI1 NFIC SP2 ZBTB17 ZNF184 POLR2A FOS ENSG00000224250 HSALNG0081158 ENSG00000223432
GH10J121832 Enhancer 0.9 Ensembl 10.8 +96.3 96298 1.2 ZSCAN5C ZNF639 ZNF10 FOXA1 TRIM28 KLF7 ZEB1 ATF2 ZNF341 OSR2 ENSG00000224250 NSMCE4A ATE1-AS1 ENSG00000201884 lnc-NSMCE4A-6 ATE1
GH10J120942 Enhancer 0.8 ENCODE 11.4 -793.3 -793300 0.2 CTCF TEAD4 GABPA REST RAD21 TRIM22 SMC3 SIN3A ZBTB17 YY1 ENSG00000224250 WDR11 LOC105378518 piR-39099-044 lnc-FGFR2-7 LOC105378519 ENSG00000227307
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000224250 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000224250 Gene

Genomic Locations for ENSG00000224250 Gene
chr10:121,736,303-121,739,730
(GRCh38/hg38)
Size:
3,428 bases
Orientation:
Plus strand
chr10:123,495,818-123,499,245
(GRCh37/hg19)
Size:
3,428 bases
Orientation:
Plus strand

Genomic View for ENSG00000224250 Gene

Genes around ENSG00000224250 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000224250 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000224250 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000224250 Gene

Proteins for ENSG00000224250 Gene

Post-translational modifications for ENSG00000224250 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000224250 Gene

Domains & Families for ENSG00000224250 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000224250 Gene

Function for ENSG00000224250 Gene

Phenotypes From GWAS Catalog for ENSG00000224250 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000224250 Gene

Localization for ENSG00000224250 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000224250 Gene

Pathways & Interactions for ENSG00000224250 Gene

PathCards logo

SuperPathways for ENSG00000224250 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for ENSG00000224250 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000224250 Gene

Drugs & Compounds for ENSG00000224250 Gene

No Compound Related Data Available

Transcripts for ENSG00000224250 Gene

mRNA/cDNA for ENSG00000224250 Gene

2 RNACentral transcripts :
1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
2 NONCODE transcripts :
2 LncBook transcripts :
1 LNCipedia transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000224250 Gene

No ASD Table

Relevant External Links for ENSG00000224250 Gene

GeneLoc Exon Structure for
ENSG00000224250

Expression for ENSG00000224250 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ENSG00000224250 Gene

genes like me logo Genes that share expression patterns with ENSG00000224250: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000224250 Gene

Orthologs for ENSG00000224250 Gene

Evolution for ENSG00000224250 Gene

ENSEMBL:
Gene Tree for ENSG00000224250 (if available)
TreeFam:
Gene Tree for ENSG00000224250 (if available)

No data available for Orthologs for ENSG00000224250 Gene

Paralogs for ENSG00000224250 Gene

No data available for Paralogs for ENSG00000224250 Gene

Variants for ENSG00000224250 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000224250 Gene

Disorders for ENSG00000224250 Gene

No disorders were found for ENSG00000224250 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000224250 Gene

Publications for ENSG00000224250 Gene

No publications were found for ENSG00000224250 Gene.

No data available for Mastermind for ENSG00000224250 Gene

Products for ENSG00000224250 Gene

Sources for ENSG00000224250 Gene