Free for academic non-profit institutions. Other users need a Commercial license

Aliases for ENSG00000223944 Gene

Quality Score for this RNA gene is

13

Aliases for ENSG00000223944 Gene

  • Novel Transcript 5
  • AL353604.1 5

External Ids for ENSG00000223944 Gene

Previous GeneCards Identifiers for ENSG00000223944 Gene

  • GC01M037729

Summaries for ENSG00000223944 Gene

GeneCards Summary for ENSG00000223944 Gene

ENSG00000223944 is an RNA Gene.

Additional gene information for ENSG00000223944 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ENSG00000223944 Gene

Genomics for ENSG00000223944 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000223944 Gene

Promoters and enhancers for ENSG00000223944 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J037326 Enhancer 0.6 ENCODE 600.7 -1.2 -1175 0.2 SP1 GTF2F1 POLR2A ZC3H8 GTF2A2 SUPT5H SMAD5 TEAD4 ENSG00000223944 LINC01137 RPS29P6
GH01J037327 Enhancer 0.5 Ensembl 600.7 -1.4 -1400 0.2 POLR2A ZC3H8 SUPT5H SMAD5 ENSG00000223944 RPS29P6
GH01J037325 Enhancer 0.2 Ensembl 600.7 0.0 -1 0.2 ENSG00000223944 RPS29P6
GH01J036370 Promoter/Enhancer 2.1 FANTOM5 Ensembl ENCODE dbSUPER 11 +951.0 951004 6.1 SP1 ELF3 ZFX ZKSCAN8 CBFA2T2 POLR2A MLLT1 ZNF121 CEBPG GTF2F1 CSF3R STK40 AGO3 LSM10 RNU4-27P SNORA63C OSCP1 ENSG00000223944 AGO1 ENSG00000116883
GH01J037318 Enhancer 0.9 FANTOM5 Ensembl 0.7 +3.8 3782 5.8 CTCF MCM2 RAD21 ZIC2 ZNF143 REST ZSCAN4 TRIM22 ZBTB17 TRIM28 EPHA10 DNALI1 LINC01137 GRIK3 ENSG00000223944 RNA5SP43
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000223944 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000223944 Gene

Genomic Locations for ENSG00000223944 Gene
chr1:37,262,739-37,325,100
(GRCh38/hg38)
Size:
62,362 bases
Orientation:
Minus strand
chr1:37,728,340-37,790,701
(GRCh37/hg19)
Size:
62,362 bases
Orientation:
Minus strand

Genomic View for ENSG00000223944 Gene

Genes around ENSG00000223944 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000223944 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000223944 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000223944 Gene

Proteins for ENSG00000223944 Gene

Post-translational modifications for ENSG00000223944 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000223944 Gene

Domains & Families for ENSG00000223944 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ENSG00000223944 Gene

Function for ENSG00000223944 Gene

Phenotypes From GWAS Catalog for ENSG00000223944 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000223944 Gene

Localization for ENSG00000223944 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000223944 Gene

Pathways & Interactions for ENSG00000223944 Gene

PathCards logo

SuperPathways for ENSG00000223944 Gene

No Data Available

Interacting Proteins for ENSG00000223944 Gene

Gene Ontology (GO) - Biological Process for ENSG00000223944 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ENSG00000223944 Gene

Drugs & Compounds for ENSG00000223944 Gene

No Compound Related Data Available

Transcripts for ENSG00000223944 Gene

mRNA/cDNA for ENSG00000223944 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
(1) RNA Central transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000223944 Gene

No ASD Table

Relevant External Links for ENSG00000223944 Gene

GeneLoc Exon Structure for
ENSG00000223944

Expression for ENSG00000223944 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ENSG00000223944 Gene

mRNA differential expression in normal tissues according to GTEx for ENSG00000223944 Gene

This gene is overexpressed in Brain - Spinal cord (cervical c-1) (x25.3) and Brain - Substantia nigra (x6.9).
genes like me logo Genes that share expression patterns with ENSG00000223944: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000223944 Gene

Orthologs for ENSG00000223944 Gene

Evolution for ENSG00000223944 Gene

ENSEMBL:
Gene Tree for ENSG00000223944 (if available)
TreeFam:
Gene Tree for ENSG00000223944 (if available)

No data available for Orthologs for ENSG00000223944 Gene

Paralogs for ENSG00000223944 Gene

No data available for Paralogs for ENSG00000223944 Gene

Variants for ENSG00000223944 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000223944 Gene

Disorders for ENSG00000223944 Gene

No disorders were found for ENSG00000223944 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000223944 Gene

Publications for ENSG00000223944 Gene

No publications were found for ENSG00000223944 Gene.

No data available for External Links for ENSG00000223944 Gene

Products for ENSG00000223944 Gene

Sources for ENSG00000223944 Gene

Content
Loading form....