Aliases for ENSG00000223923 Gene

Aliases for ENSG00000223923 Gene

  • Novel Transcript 5
  • HSALNG0022218 167
  • NONHSAG030509 92
  • Lnc-RUFY4-1 168
  • AC010136.1 5

External Ids for ENSG00000223923 Gene

Previous GeneCards Identifiers for ENSG00000223923 Gene

  • GC02P218844

Summaries for ENSG00000223923 Gene

GeneCards Summary for ENSG00000223923 Gene

ENSG00000223923 is an Uncategorized gene.

Additional gene information for ENSG00000223923 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000223923 Gene

Genomics for ENSG00000223923 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000223923 Gene

Promoters and enhancers for ENSG00000223923 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH02J217976 Promoter/Enhancer 2 FANTOM5 Ensembl ENCODE CraniofacialAtlas dbSUPER 500.7 -0.5 -548 7.1 ZNF623 HDAC2 ZNF207 PHF8 NONO ZFHX2 FOSL2 EZH2 NFIB SIN3A ENSG00000223923 LOC105373878 TNS1 lnc-RUFY4-4
GH02J217926 Promoter/Enhancer 2.5 VISTA EPDnew FANTOM5 Ensembl ENCODE CraniofacialAtlas dbSUPER 11.5 -43.1 -43148 18.3 ZNF217 TCF12 USF1 POLR2G JUND FOS ZIC2 REST ZBTB7A SKI TNS1 SLC11A1 ENSG00000223923 PNKD CXCR2 ARPC2 TMBIM1 lnc-RUFY4-4 MIR6809
GH02J217897 Promoter/Enhancer 2.3 EPDnew FANTOM5 Ensembl ENCODE CraniofacialAtlas dbSUPER 11.9 -76.2 -76203 9.9 EP300 FOXK2 CTCF TCF12 POLR2G NCOR1 JUND TEAD4 FOS ZIC2 TNS1 MIR6809 SLC11A1 CNOT9 AAMP ENSG00000223923 USP37 ZNF142 RUFY4 PNKD
GH02J217834 Promoter/Enhancer 1.9 EPDnew FANTOM5 Ensembl ENCODE CraniofacialAtlas dbSUPER 10.7 -140.1 -140106 10.8 EP300 POLR2G USF1 FOS PHB2 ZIC2 FOXA1 AFF1 RFX1 MYC TNS1 ENSG00000223923 PNKD SNORA115-001 5MWI_A-104
GH02J217845 Promoter/Enhancer 1.9 FANTOM5 Ensembl ENCODE CraniofacialAtlas dbSUPER 10.7 -125.9 -125945 15.3 EP300 NONO FOS ZIC2 TRIM28 MYC MCM3 MXI1 ZNF316 NFIC TNS1 USP37 ENSG00000223923 PLCD4 PNKD ARPC2 5MWI_A-104 MIR6809
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000223923 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000223923 Gene

Genomic Locations for ENSG00000223923 Gene
chr2:217,978,707-217,993,747
(GRCh38/hg38)
Size:
15,041 bases
Orientation:
Plus strand
chr2:218,843,430-218,857,338
(GRCh37/hg19)
Size:
13,909 bases
Orientation:
Plus strand

Genomic View for ENSG00000223923 Gene

Genes around ENSG00000223923 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000223923 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000223923 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000223923 Gene

Proteins for ENSG00000223923 Gene

Post-translational modifications for ENSG00000223923 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000223923 Gene

Domains & Families for ENSG00000223923 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000223923 Gene

Function for ENSG00000223923 Gene

Phenotypes From GWAS Catalog for ENSG00000223923 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000223923 Gene

Localization for ENSG00000223923 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000223923 Gene

Pathways & Interactions for ENSG00000223923 Gene

PathCards logo

SuperPathways for ENSG00000223923 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for ENSG00000223923 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000223923 Gene

Drugs & Compounds for ENSG00000223923 Gene

No Compound Related Data Available

Transcripts for ENSG00000223923 Gene

mRNA/cDNA for ENSG00000223923 Gene

1 REFSEQ mRNAs :
2 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
5 RNACentral transcripts :
4 NONCODE transcripts :
3 LncBook transcripts :
3 LNCipedia transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000223923 Gene

No ASD Table

Relevant External Links for ENSG00000223923 Gene

GeneLoc Exon Structure for
ENSG00000223923

Expression for ENSG00000223923 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ENSG00000223923 Gene

mRNA differential expression in normal tissues according to GTEx for ENSG00000223923 Gene

This gene is overexpressed in Ovary (x4.4).
genes like me logo Genes that share expression patterns with ENSG00000223923: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000223923 Gene

Orthologs for ENSG00000223923 Gene

Evolution for ENSG00000223923 Gene

ENSEMBL:
Gene Tree for ENSG00000223923 (if available)
TreeFam:
Gene Tree for ENSG00000223923 (if available)

No data available for Orthologs for ENSG00000223923 Gene

Paralogs for ENSG00000223923 Gene

No data available for Paralogs for ENSG00000223923 Gene

Variants for ENSG00000223923 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000223923 Gene

Disorders for ENSG00000223923 Gene

No disorders were found for ENSG00000223923 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000223923 Gene

Publications for ENSG00000223923 Gene

No publications were found for ENSG00000223923 Gene.

No data available for Mastermind for ENSG00000223923 Gene

Products for ENSG00000223923 Gene

Sources for ENSG00000223923 Gene