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Aliases for ENSG00000223881 Gene

Quality Score for this RNA gene is

13

Aliases for ENSG00000223881 Gene

  • AL157402.1 5

External Ids for ENSG00000223881 Gene

Summaries for ENSG00000223881 Gene

GeneCards Summary for ENSG00000223881 Gene

ENSG00000223881 is an RNA Gene.

Additional gene information for ENSG00000223881 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ENSG00000223881 Gene

Genomics for ENSG00000223881 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000223881 Gene

Promoters and enhancers for ENSG00000223881 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J198597 Promoter/Enhancer 1.8 EPDnew Ensembl ENCODE dbSUPER 650.7 +0.3 304 3 SMAD1 ARNT IRF4 TCF12 GATA2 ATF7 RUNX3 NCOA1 ZNF592 MBD2 ATP6V1G3 ENSG00000223881
GH01J198602 Enhancer 1.1 Ensembl ENCODE dbSUPER 0.7 -3.4 -3432 0.6 HDGF CTCF PKNOX1 SMAD1 EBF1 BATF IRF4 RELA EED ETV6 ATP6V1G3 ENSG00000223881 PTPRC
GH01J198617 Enhancer 1.5 FANTOM5 Ensembl ENCODE dbSUPER 0.3 -23.0 -23012 8 HDGF PKNOX1 SMAD1 BMI1 BATF KLF5 IRF4 ZNF207 ATF7 FOS PTPRC NEK7 ENSG00000223881
GH01J198633 Enhancer 1.5 FANTOM5 Ensembl ENCODE dbSUPER 0.3 -35.1 -35108 1.3 HDAC1 PKNOX1 ATF1 ARNT NCOA2 TCF12 ZNF766 ETV6 ATF7 IKZF2 ATP6V1G3 PTPRC LOC105371679 ENSG00000223881
GH01J198604 Enhancer 1 ENCODE dbSUPER 0.4 -6.8 -6817 2.1 HDAC1 PKNOX1 ARNT TCF12 ZNF766 REST ZNF148 NFIC KLF16 SMARCA4 ATP6V1G3 ENSG00000223881 PTPRC
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000223881 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000223881 Gene

Genomic Locations for ENSG00000223881 Gene
chr1:198,597,724-198,598,868
(GRCh38/hg38)
Size:
1,145 bases
Orientation:
Minus strand
chr1:198,566,854-198,567,998
(GRCh37/hg19)
Size:
1,145 bases
Orientation:
Minus strand

Genomic View for ENSG00000223881 Gene

Genes around ENSG00000223881 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000223881 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000223881 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000223881 Gene

Proteins for ENSG00000223881 Gene

Post-translational modifications for ENSG00000223881 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000223881 Gene

Domains & Families for ENSG00000223881 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ENSG00000223881 Gene

Function for ENSG00000223881 Gene

Phenotypes From GWAS Catalog for ENSG00000223881 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000223881 Gene

Localization for ENSG00000223881 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000223881 Gene

Pathways & Interactions for ENSG00000223881 Gene

SuperPathways for ENSG00000223881 Gene

No Data Available

Interacting Proteins for ENSG00000223881 Gene

Gene Ontology (GO) - Biological Process for ENSG00000223881 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ENSG00000223881 Gene

Drugs & Compounds for ENSG00000223881 Gene

No Compound Related Data Available

Transcripts for ENSG00000223881 Gene

mRNA/cDNA for ENSG00000223881 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :
(1) RNA Central transcripts :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000223881 Gene

No ASD Table

Relevant External Links for ENSG00000223881 Gene

GeneLoc Exon Structure for
ENSG00000223881

Expression for ENSG00000223881 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ENSG00000223881 Gene

mRNA differential expression in normal tissues according to GTEx for ENSG00000223881 Gene

This gene is overexpressed in Kidney - Cortex (x18.0), Spleen (x11.7), and Small Intestine - Terminal Ileum (x5.5).
genes like me logo Genes that share expression patterns with ENSG00000223881: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000223881 Gene

Orthologs for ENSG00000223881 Gene

Evolution for ENSG00000223881 Gene

ENSEMBL:
Gene Tree for ENSG00000223881 (if available)
TreeFam:
Gene Tree for ENSG00000223881 (if available)

No data available for Orthologs for ENSG00000223881 Gene

Paralogs for ENSG00000223881 Gene

No data available for Paralogs for ENSG00000223881 Gene

Variants for ENSG00000223881 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000223881 Gene

Disorders for ENSG00000223881 Gene

No disorders were found for ENSG00000223881 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000223881 Gene

Publications for ENSG00000223881 Gene

No publications were found for ENSG00000223881 Gene.

Products for ENSG00000223881 Gene

Sources for ENSG00000223881 Gene

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