Aliases for ENSG00000223842 Gene
Quality Score for this RNA gene is
13
Aliases for ENSG00000223842 Gene
- AL360093.1 5
External Ids for ENSG00000223842 Gene
- Ensembl: ENSG00000223842
Previous GeneCards Identifiers for ENSG00000223842 Gene
- GC01M219395
Summaries for ENSG00000223842 Gene
GeneCards Summary for ENSG00000223842 Gene
ENSG00000223842 is an RNA Gene.
Additional gene information for ENSG00000223842 Gene
No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ENSG00000223842 Gene
Genomics for ENSG00000223842 Gene
GeneHancer (GH) Regulatory Elements for ENSG00000223842 Gene
Promoters and enhancers for ENSG00000223842 Gene
| GeneHancer (GH) Identifier | GH Type | GH Score |
GH Sources | Gene Association Score | Total Score | TSS distance (kb) | Number of Genes Away | Size (kb) | Transcription Factor Binding Sites |
Gene Targets |
|---|---|---|---|---|---|---|---|---|---|---|
| GH01J218284 | Promoter/Enhancer | 2.1 | EPDnew Ensembl ENCODE | 12.2 | +940.0 | 939987 | 2.2 | CLOCK ZFP64 DMAP1 YY1 SLC30A9 ZNF213 E2F8 ZNF143 SP3 ZNF610 | RRP15 RIMKLBP2 ENSG00000223842 GC01M218293 | |
| GH01J219906 | Enhancer | 1.2 | Ensembl ENCODE | 12.1 | -681.9 | -681949 | 1.4 | HDGF PKNOX1 SMAD1 FOXA2 ARNT YBX1 POLR2B ZNF766 E2F8 ZNF592 | ZC3H11B RPS15AP12 SLC30A10 RIMKLBP2 ENSG00000223842 SNX2P1 GC01P219890 | |
| GH01J219048 | Enhancer | 0.6 | ENCODE | 11.5 | +175.9 | 175902 | 2.2 | ESRRA SUZ12 ZBTB5 CTBP1 NONO ZNF366 ZNF512 ZNF24 PRDM1 | RIMKLBP2 ENSG00000223842 GC01M219069 LINC01710 |
- Elite GeneHancer and/or Elite GeneHancer-gene association
Download GeneHancer data dump
GeneHancers around ENSG00000223842 on UCSC Golden Path with GeneCards custom track
Regulatory Element Products
Genomic Locations for ENSG00000223842 Gene
Genomic Locations for ENSG00000223842 Gene
- chr1:219,222,248-219,225,497
- (GRCh38/hg38)
- Size:
- 3,250 bases
- Orientation:
- Minus strand
- chr1:219,395,590-219,398,839
- (GRCh37/hg19)
Genomic View for ENSG00000223842 Gene
Genes around ENSG00000223842 on UCSC Golden Path with GeneCards custom track
- Cytogenetic band:
-
- 1q41 by Ensembl
ENSG00000223842 Gene in genomic location: bands according to
Ensembl, locations according to GeneLoc
(and/or Entrez Gene and/or Ensembl if different)
Genomic Neighborhood
• Exon Structure
• Gene Density
No data available for RefSeq DNA sequence for ENSG00000223842 Gene
Proteins for ENSG00000223842 Gene
Post-translational modifications for ENSG00000223842 Gene
No Post-translational modifications
Antibody Products
- Search GeneTex for Antibodies for ENSG00000223842
Protein Products
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for ENSG00000223842
- Origene Custom Protein Services for ENSG00000223842
- Search GeneTex for Proteins for ENSG00000223842
No data available for DME Specific Peptides for ENSG00000223842 Gene
Domains & Families for ENSG00000223842 Gene
Graphical View of Domain Structure for InterPro Entry
No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ENSG00000223842 Gene
Function for ENSG00000223842 Gene
Phenotypes From GWAS Catalog for ENSG00000223842 Gene
Animal Model Products
- Taconic Biosciences: Generate A Custom CRISPR Mouse Model For Your Study
- Cyagen custom Knockout/knockin (KOKI) mouse models for ENSG00000223842
-
miRNA Products
Inhibitory RNA Products
Clone Products
- GenScript: Custom all cDNA clones Services for ENSG00000223842
- VectorBuilder custom plasmid, inducible vectors for ENSG00000223842
- VectorBuilder custom lentivirus, adenovirus, AAV vector/virus packaging for ENSG00000223842
-
VectorBuilder Other custom vectors
- Mammalian expression: PiggyBac
- Mammalian Tet-on expression: plasmid
- Mammalian conditional (Cre-Lox): plasmid and PiggyBac
- Mammalian shRNA knockdown: lentiviral, adenoviral, AAV, and PiggyBac
- CRISPR: plasmid gRNA, lentiviral gRNA, and donor plasmid
- Bacterial expression: pET, pBAD, and pCS
- Yeast expression
No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000223842 Gene
Localization for ENSG00000223842 Gene
No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000223842 Gene
Transcripts for ENSG00000223842 Gene
mRNA/cDNA for ENSG00000223842 Gene
- (1) Ensembl transcripts including schematic representations, and UCSC links where relevant :
-
- ENST00000420237 1126 bps (uc057pmt.1)
- (1) RNA Central transcripts :
CRISPR Products
- Browse CRISPR knockouts for ENSG00000223842
miRNA Products
Inhibitory RNA Products
Clone Products
- GenScript: Custom all cDNA clones Services for ENSG00000223842
- VectorBuilder custom plasmid, inducible vectors for ENSG00000223842
- VectorBuilder custom lentivirus, adenovirus, AAV vector/virus packaging for ENSG00000223842
-
VectorBuilder Other custom vectors
- Mammalian expression: PiggyBac
- Mammalian Tet-on expression: plasmid
- Mammalian conditional (Cre-Lox): plasmid and PiggyBac
- Mammalian shRNA knockdown: lentiviral, adenoviral, AAV, and PiggyBac
- CRISPR: plasmid gRNA, lentiviral gRNA, and donor plasmid
- Bacterial expression: pET, pBAD, and pCS
- Yeast expression
Relevant External Links for ENSG00000223842 Gene
- GeneLoc Exon Structure for
- ENSG00000223842
Expression for ENSG00000223842 Gene
Primer Products
No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000223842 Gene
Orthologs for ENSG00000223842 Gene
No data available for Orthologs for ENSG00000223842 Gene
Paralogs for ENSG00000223842 Gene
No data available for Paralogs for ENSG00000223842 Gene
Variants for ENSG00000223842 Gene
No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000223842 Gene
Disorders for ENSG00000223842 Gene
No disorders were found for ENSG00000223842 Gene.
No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000223842 Gene
Publications for ENSG00000223842 Gene
No publications were found for ENSG00000223842 Gene.
Products for ENSG00000223842 Gene
- Browse R&D Systems for Antibodies
- Browse R&D Systems for Human Recombinant Proteins
- Browse R&D Systems for biochemical assays
- Browse Human Proteins and Enzymes
- Browse Primary Antibodies
- Browse Proteins and Enzymes
- Browse ELISAs
- Browse Activity Assays
- Browse cDNA Clones
- Browse Cell Culture Products
- Browse Cell Selection and Detection Kits
- Browse DNA Damage and Repair Kits
- Browse ELISpot/FluoroSpot Kits and Development Modules
- Browse Flow Cytometry Kits
- Browse Immunoprecipitation Assays
- Browse Luminex Assays
- Browse Peptides
- Browse Proteome Profiler Antibody Arrays
- Browse Small Molecules
- Browse OriGene Antibodies
- Custom Antibody Services
- Browse OriGene ELISA Kits
- Custom Assay Services
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for ENSG00000223842
- Origene Custom Protein Services for ENSG00000223842
- Browse OriGene Inhibitory RNA Products For ENSG00000223842
- Browse OriGene qPCR primer pairs and template standards
- Browse CRISPR knockouts for ENSG00000223842
- Custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling
- Browse OriGene miRNA Products For ENSG00000223842
- GenScript: Custom all cDNA clones Services for ENSG00000223842
- GenScript Custom Purified and Recombinant Proteins Services for ENSG00000223842
- GenScript Custom Assay Services for ENSG00000223842
- GenScript Custom overexpressing Cell Line Services for ENSG00000223842
- Browse GenScript CRISPR for ENSG00000223842
- Design optimal peptide antigens
- CloneReady with Over 120,000 Genes
- Gene Synthesis: Any Gene in Any Vector
- Vector-based siRNA and miRNA, Ready for Transfection
- Gene Mutant Library, Variants up to 10^11
- Plasmid Preparation
- GenScript Custom Peptide Services for ENSG00000223842
- Browse Sino Biological cDNA Clones
- Browse Sino Biological Cell Lysates
- Browse Sino Biological Recombinant Proteins
- Browse Sino Biological Antibodies
- Browse Sino Biological Assays
- Browse Sino Biological ELISA Kits
- Browse Sino Biological ELISA Pair Sets
- Browse Sino Biological CRO Services
- Browse Sino Biological Control Vectors
- Sino Biological Transfection Reagent
- Sino Biological Anti-His Tag Antibody
- Cyagen custom Knockout/knockin (KOKI) mouse models for ENSG00000223842
- VectorBuilder custom plasmid, inducible vectors for ENSG00000223842
- VectorBuilder custom lentivirus, adenovirus, AAV vector/virus packaging for ENSG00000223842
- VectorBuilder Other custom vectors
- Mammalian expression: PiggyBac
- Mammalian Tet-on expression: plasmid
- Mammalian conditional (Cre-Lox): plasmid and PiggyBac
- Mammalian shRNA knockdown: lentiviral, adenoviral, AAV, and PiggyBac
- CRISPR: plasmid gRNA, lentiviral gRNA, and donor plasmid
- Bacterial expression: pET, pBAD, and pCS
- Yeast expression
- Search GeneTex for Antibodies for ENSG00000223842
- Search GeneTex for Proteins for ENSG00000223842
- Browse GeneCopoeia Cell Lines
- Search GeneCopoeia for knockout CRISPR/Cas9 clones, lentivirus, and/or AAV products for ENSG00000223842
- Search GeneCopoeia for ORF cDNA, lentivirus, AAV viral particles, and/or promoter clone products for ENSG00000223842
- Search GeneCopoeia for miRNA 3'UTR Target clone products for ENSG00000223842
- Search GeneCopoeia for shRNA, lentivirus, and/or AAV clone products for ENSG00000223842
Sources for ENSG00000223842 Gene
- (1) GeneCards
- (2) HGNC
- (3) EntrezGene
- (4) Swiss-Prot
- (5) Ensembl
- (6) OMIM
- (7) GeneLoc
- (8) Gene Wiki
- (9) UCSC
- (10) PhosphoSitePlus
- (11) GO
- (12) TrEMBL
- (13) InterPro
- (14) ProtoNet
- (15) Blocks
- (16) MGI
- (17) IUBMB
- (18) KEGG
- (19) MINT
- (20) STRING
- (21) IntAct
- (22) Novoseek
- (23) PharmGKB
- (24) DrugBank
- (25) HMDB
- (26) UniGene
- (27) AceView
- (28) ASD
- (29) ECgene
- (30) GeneAnnot
- (31) CGAP SAGE
- (32) SOURCE
- (33) HomoloGene
- (34) PanEnsembl
- (35) euGenes
- (36) SGD
- (37) FlyBase
- (38) WormBase
- (39) Pseudogene
- (40) DGV
- (41) dbSNP
- (42) GenAtlas
- (43) HGMD
- (44) GAD
- (45) BGMUT
- (46) HuGE
- (47) Atlas
- (48) Cell Signaling Technology
- (49) GenBank
- (50) H-invDB
- (51) HORDE
- (52) HUGE
- (53) IMGT
- (54) Leiden
- (55) miRBase
- (56) DME
- (57) OriGene
- (58) PubMed
- (59) R&D Systems
- (60) TGDB
- (61) Tocris
- (62) Abcam
- (63) Novus Biologicals
- (64) ProSpec
- (65) Sino Biological
- (66) GenScript
- (67) Qiagen
- (68) Cloud-Clone Corp.
- (69) OCA
- (70) Proteopedia
- (71) MOPED
- (72) neXtProt
- (73) Reactome
- (74) GeneGo (Thomson Reuters)
- (75) fRNAdb
- (76) DISEASES
- (77) SIMAP
- (78) GenomeRNAi
- (79) LifeMap
- (80) miRTarBase
- (81) MalaCards
- (82) Invitrogen
- (83) BitterDB
- (84) Vector BioLabs
- (85) ESI-BIO
- (86) RefSeq
- (87) BioSystems
- (88) MaxQB
- (89) IUPHAR
- (90) BioGPS
- (91) Illumina
- (92) COMPARTMENTS
- (93) HOMER
- (94) PaxDb
- (95) ApexBio
- (96) Addgene
- (97) antibodies-online
- (98) CYP
- (99) NONCODE
- (100) SwitchGear Genomics
- (101) TreeFam
- (102) PathCards
- (103) GeneReviews
- (104) GeneTex
- (105) Taconic Biosciences
- (106) GTEx
- (107) ProteomicsDB
- (108) SCBT
- (109) DGIdb
- (110) ClinicalTrials
- (111) FDA Approved Drugs
- (112) RVIS
- (113) SIGNOR
- (114) diseasecard
- (115) NIH Rare Diseases
- (116) Orphanet
- (117) UMLS
- (118) GTR
- (119) Disease Ontology
- (120) Genetics Home Reference
- (121) MeSH
- (122) MedlinePlus
- (123) CDC
- (124) NINDS
- (125) NCBI Bookshelf
- (126) ClinVar
- (127) Gene Damage Index
- (128) ViGene Biosciences
- (129) HPO
- (130) UDN
- (131) VISTA
- (132) FANTOM5
- (133) ENCODE
- (134) ProSci
- (135) Horizon
- (136) NURSA
- (137) IID
- (138) Cyagen
- (139) VectorBuilder
- (140) SNPedia
- (141) BRCA Exchange
- (142) St John's Lab
- (143) CIViC
- (144) ProteoGenix
- (145) dbSUPER
- (146) TISSUES
- (147) Gene ORGANizer
- (148) abm
- (149) CrownBio
- (150) Human Protein Atlas
- (151) GWAS Catalog
- (152) Monarch Initiative
- (153) DataMed
- (154) HumanCyc
- (155) genomics-online
- (156) UCNEbase
- (157) EPDnew
- (158) Applied Biosystems
- (159) GlyConnect
- (160) Aminode
- (161) GeneCopoeia
- (162) GPS-Prot
- (163) RNACentral
- (164) LncRNADisease
- (165) LOVD
- (166) miR2Disease
- (167) DiseaseEnhancer
- (168) Boster Bio