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Aliases for ENSG00000223563 Gene

Quality Score for this RNA gene is

13

Aliases for ENSG00000223563 Gene

  • Novel Transcript 5
  • AP001599.1 5

External Ids for ENSG00000223563 Gene

Previous GeneCards Identifiers for ENSG00000223563 Gene

  • GC21P028261

Summaries for ENSG00000223563 Gene

GeneCards Summary for ENSG00000223563 Gene

ENSG00000223563 is an RNA Gene.

Additional gene information for ENSG00000223563 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ENSG00000223563 Gene

Genomics for ENSG00000223563 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000223563 Gene

Promoters and enhancers for ENSG00000223563 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH21J026795 Enhancer 1.1 Ensembl ENCODE 9.8 -92.9 -92925 2.8 SP7 PRDM1 CREB1 ZNF600 PRDM10 ZEB2 ZNF639 ZNF629 PATZ1 ZNF692 ENSG00000223563 GC21M026844 ADAMTS1 CYYR1
GH21J026943 Enhancer 0.9 FANTOM5 Ensembl ENCODE dbSUPER 11.1 +58.3 58325 10.6 ATF2 ENSG00000223563 CYYR1 MIR4759 ADAMTS5 GC21M026919 LOC105372760
GH21J026939 Enhancer 0.9 Ensembl ENCODE dbSUPER 11 +50.5 50545 1.1 SP1 RXRA FOXA2 HNF4A ADAMTS5 ENSG00000223563 MIR4759 GC21M026919 LOC105372760
GH21J026918 Enhancer 0.8 Ensembl ENCODE 11.1 +29.4 29394 1.5 CREB1 BRCA1 CEBPB JUN JUND NFYB FOS EP300 GC21M026919 ENSG00000223563 ADAMTS5 LOC105372760
GH21J026910 Enhancer 0.7 Ensembl ENCODE 11.3 +21.1 21125 1.8 SP1 RAD21 CTCF POU5F1 ENSG00000223563 ADAMTS5 GC21M026919 LOC105372760
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000223563 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000223563 Gene

Genomic Locations for ENSG00000223563 Gene
chr21:26,889,376-26,939,742
(GRCh38/hg38)
Size:
50,367 bases
Orientation:
Plus strand
chr21:28,261,695-28,312,061
(GRCh37/hg19)
Size:
50,367 bases
Orientation:
Plus strand

Genomic View for ENSG00000223563 Gene

Genes around ENSG00000223563 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000223563 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000223563 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000223563 Gene

Proteins for ENSG00000223563 Gene

Post-translational modifications for ENSG00000223563 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000223563 Gene

Domains & Families for ENSG00000223563 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ENSG00000223563 Gene

Function for ENSG00000223563 Gene

Phenotypes From GWAS Catalog for ENSG00000223563 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000223563 Gene

Localization for ENSG00000223563 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000223563 Gene

Pathways & Interactions for ENSG00000223563 Gene

PathCards logo

SuperPathways for ENSG00000223563 Gene

No Data Available

Interacting Proteins for ENSG00000223563 Gene

Gene Ontology (GO) - Biological Process for ENSG00000223563 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ENSG00000223563 Gene

Drugs & Compounds for ENSG00000223563 Gene

No Compound Related Data Available

Transcripts for ENSG00000223563 Gene

mRNA/cDNA for ENSG00000223563 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
(1) RNA Central transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000223563 Gene

No ASD Table

Relevant External Links for ENSG00000223563 Gene

GeneLoc Exon Structure for
ENSG00000223563

Expression for ENSG00000223563 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ENSG00000223563 Gene

mRNA differential expression in normal tissues according to GTEx for ENSG00000223563 Gene

This gene is overexpressed in Thyroid (x9.3) and Testis (x4.8).
genes like me logo Genes that share expression patterns with ENSG00000223563: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000223563 Gene

Orthologs for ENSG00000223563 Gene

Evolution for ENSG00000223563 Gene

ENSEMBL:
Gene Tree for ENSG00000223563 (if available)
TreeFam:
Gene Tree for ENSG00000223563 (if available)

No data available for Orthologs for ENSG00000223563 Gene

Paralogs for ENSG00000223563 Gene

No data available for Paralogs for ENSG00000223563 Gene

Variants for ENSG00000223563 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000223563 Gene

Disorders for ENSG00000223563 Gene

No disorders were found for ENSG00000223563 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000223563 Gene

Publications for ENSG00000223563 Gene

No publications were found for ENSG00000223563 Gene.

No data available for External Links for ENSG00000223563 Gene

Products for ENSG00000223563 Gene

Sources for ENSG00000223563 Gene

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