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Aliases for ENSG00000223461 Gene

Quality Score for this RNA gene is

13

Aliases for ENSG00000223461 Gene

  • Novel Transcript 5
  • AC004471.1 5

External Ids for ENSG00000223461 Gene

Previous GeneCards Identifiers for ENSG00000223461 Gene

  • GC22P019109

Summaries for ENSG00000223461 Gene

GeneCards Summary for ENSG00000223461 Gene

ENSG00000223461 is an RNA Gene.

Additional gene information for ENSG00000223461 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ENSG00000223461 Gene

Genomics for ENSG00000223461 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000223461 Gene

Promoters and enhancers for ENSG00000223461 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH22J019119 Promoter/Enhancer 2.2 EPDnew Ensembl ENCODE dbSUPER 600.7 +0.2 231 3.7 HDGF CC2D1A SP1 ZFX ZNF148 NKRF POLR2A MLLT1 GTF2F1 ZSCAN21 DGCR2 ENSG00000223461 DGCR11 TRMT2A
GH22J019169 Promoter/Enhancer 2.3 EPDnew Ensembl ENCODE dbSUPER 12 +53.3 53271 11 HDGF SP1 CC2D1A ELF3 MNT SIX5 CBFA2T2 NKRF POLR2A MLLT1 SLC25A1 CLTCL1 GSC2 ESS2 TSSK2 TSSK1A DGCR2 ENSG00000223461 UFD1 ENSG00000235776
GH22J019143 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE 12.1 +22.9 22871 2.4 CC2D1A SP1 CTCF ZFX SIX5 ZNF148 NKRF POLR2A MLLT1 GTF2F1 ESS2 DGCR8 TRMT2A RPL8P5 ENSG00000235776 ENSG00000273300 LINC01311 ENSG00000223461 DGCR2 UFD1
GH22J019095 Enhancer 1 Ensembl ENCODE dbSUPER 12.5 -23.4 -23428 5.4 ZNF121 MAFK GTF2E2 ZNF316 SCRT2 SCRT1 MAFG NFIC TARDBP ZBTB33 DGCR2 DGCR11 ENSG00000223461 TSSK1A TSSK2 PIR39211 GC22P019324
GH22J019625 Enhancer 0.9 Ensembl 10.5 +505.2 505226 3.1 ZFX CC2D1A MLLT1 GTF2F1 CSDE1 CDC5L TRIM24 SMARCA4 MTA1 CAVIN1 CLDN5 CDC45 UFD1 TSSK2 DGCR2 TSSK1A ENSG00000223461 LOC100129254 LINC00895
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000223461 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000223461 Gene

Genomic Locations for ENSG00000223461 Gene
chr22:19,121,529-19,124,503
(GRCh38/hg38)
Size:
2,975 bases
Orientation:
Plus strand
chr22:19,109,042-19,112,016
(GRCh37/hg19)
Size:
2,975 bases
Orientation:
Plus strand

Genomic View for ENSG00000223461 Gene

Genes around ENSG00000223461 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000223461 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000223461 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000223461 Gene

Proteins for ENSG00000223461 Gene

Post-translational modifications for ENSG00000223461 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000223461 Gene

Domains & Families for ENSG00000223461 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ENSG00000223461 Gene

Function for ENSG00000223461 Gene

Phenotypes From GWAS Catalog for ENSG00000223461 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000223461 Gene

Localization for ENSG00000223461 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000223461 Gene

Pathways & Interactions for ENSG00000223461 Gene

PathCards logo

SuperPathways for ENSG00000223461 Gene

No Data Available

Interacting Proteins for ENSG00000223461 Gene

Gene Ontology (GO) - Biological Process for ENSG00000223461 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ENSG00000223461 Gene

Drugs & Compounds for ENSG00000223461 Gene

No Compound Related Data Available

Transcripts for ENSG00000223461 Gene

mRNA/cDNA for ENSG00000223461 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
(1) RNA Central transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000223461 Gene

No ASD Table

Relevant External Links for ENSG00000223461 Gene

GeneLoc Exon Structure for
ENSG00000223461

Expression for ENSG00000223461 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ENSG00000223461 Gene

mRNA differential expression in normal tissues according to GTEx for ENSG00000223461 Gene

This gene is overexpressed in Whole Blood (x5.0) and Testis (x4.1).
genes like me logo Genes that share expression patterns with ENSG00000223461: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000223461 Gene

Orthologs for ENSG00000223461 Gene

Evolution for ENSG00000223461 Gene

ENSEMBL:
Gene Tree for ENSG00000223461 (if available)
TreeFam:
Gene Tree for ENSG00000223461 (if available)

No data available for Orthologs for ENSG00000223461 Gene

Paralogs for ENSG00000223461 Gene

No data available for Paralogs for ENSG00000223461 Gene

Variants for ENSG00000223461 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000223461 Gene

Disorders for ENSG00000223461 Gene

No disorders were found for ENSG00000223461 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000223461 Gene

Publications for ENSG00000223461 Gene

No publications were found for ENSG00000223461 Gene.

No data available for External Links for ENSG00000223461 Gene

Products for ENSG00000223461 Gene

Sources for ENSG00000223461 Gene

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