Free for academic non-profit institutions. Other users need a Commercial license

Aliases for ENSG00000223398 Gene

Subcategory (RNA class) for ENSG00000223398 Gene

lncRNA

Aliases for ENSG00000223398 Gene

  • AC027124.1 5

External Ids for ENSG00000223398 Gene

ORGUL Members for ENSG00000223398 Gene

Previous GeneCards Identifiers for ENSG00000223398 Gene

  • GC03M013502
  • GC03M013503
  • GC03M013505
  • GC03M013507
  • GC03M013509
  • GC03M013603
  • GC03M013619
  • GC03M013665
  • GC03M013760
  • GC03M013883
  • GC03M013997
  • GC03M014118
  • GC03M014244
  • GC03M014365

Summaries for ENSG00000223398 Gene

GeneCards Summary for ENSG00000223398 Gene

ENSG00000223398 is an Uncategorized gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000223398 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ENSG00000223398 Gene

Genomics for ENSG00000223398 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000223398 Gene

Promoters and enhancers for ENSG00000223398 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH03J013461 Enhancer 1 ENCODE 650.7 -0.8 -837 0.2 HDGF FOXA2 MLX ARNT ARID4B SIN3A DMAP1 ZNF2 SLC30A9 ZNF143 ENSG00000223398 ENSG00000238138 LOC100128772 XPC ENSG00000228242 GC03M014607
GH03J014401 Promoter/Enhancer 2.6 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 14.6 -943.4 -943357 5.2 HDGF PKNOX1 CLOCK ARNT ZFP64 ARID4B NEUROD1 SIN3A DMAP1 ZNF2 SLC6A6 CCDC174 NR2C2 ENSG00000230172 ENSG00000223398 HDAC11-AS1 MRPS25 XPC SH3BP5-AS1 ENSG00000228242
GH03J013878 Promoter/Enhancer 1.8 EPDnew FANTOM5 Ensembl ENCODE 14.6 -418.7 -418728 3.2 KLF17 ZNF2 RAD21 ZEB1 ZNF335 GLIS2 CREM EGR2 SP3 ZNF280D WNT7A HDAC11-AS1 ENSG00000223398 ENSG00000230172 C3orf20 VN1R20P GC03M014606
GH03J014438 Enhancer 1.7 FANTOM5 Ensembl ENCODE dbSUPER 14.6 -979.6 -979560 3.9 PKNOX1 SMAD1 ARNT FEZF1 ZNF2 YY1 ZNF213 FOS ZNF263 REST XPC CCDC174 CAPN7 SH3BP5-AS1 SLC6A6 ENSG00000228242 NR2C2 ENSG00000230172 HDAC11-AS1 ENSG00000223398
GH03J014450 Enhancer 1.6 FANTOM5 Ensembl ENCODE dbSUPER 14.6 -992.4 -992409 5 FOXA2 ARNT ARID4B SIN3A FEZF1 GLI4 ZNF48 ZNF121 POLR2B GLIS2 SH3BP5-AS1 CCDC174 SLC6A6 CAPN7 NR2C2 ENSG00000228242 XPC ENSG00000230172 ENSG00000223398 HDAC11-AS1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around ENSG00000223398 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000223398 Gene

Genomic Locations for ENSG00000223398 Gene
chr3:13,460,424-13,460,889
(GRCh38/hg38)
Size:
466 bases
Orientation:
Minus strand
chr3:13,501,924-13,502,389
(GRCh37/hg19)

Genomic View for ENSG00000223398 Gene

Genes around ENSG00000223398 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000223398 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000223398 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000223398 Gene

Proteins for ENSG00000223398 Gene

Post-translational modifications for ENSG00000223398 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000223398 Gene

Domains & Families for ENSG00000223398 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ENSG00000223398 Gene

Function for ENSG00000223398 Gene

Phenotypes From GWAS Catalog for ENSG00000223398 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000223398 Gene

Localization for ENSG00000223398 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000223398 Gene

Pathways & Interactions for ENSG00000223398 Gene

SuperPathways for ENSG00000223398 Gene

No Data Available

Interacting Proteins for ENSG00000223398 Gene

Gene Ontology (GO) - Biological Process for ENSG00000223398 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ENSG00000223398 Gene

Drugs & Compounds for ENSG00000223398 Gene

No Compound Related Data Available

Transcripts for ENSG00000223398 Gene

mRNA/cDNA for ENSG00000223398 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000223398 Gene

No ASD Table

Relevant External Links for ENSG00000223398 Gene

GeneLoc Exon Structure for
ENSG00000223398

Expression for ENSG00000223398 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ENSG00000223398 Gene

genes like me logo Genes that share expression patterns with ENSG00000223398: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000223398 Gene

Orthologs for ENSG00000223398 Gene

Evolution for ENSG00000223398 Gene

ENSEMBL:
Gene Tree for ENSG00000223398 (if available)
TreeFam:
Gene Tree for ENSG00000223398 (if available)

No data available for Orthologs for ENSG00000223398 Gene

Paralogs for ENSG00000223398 Gene

No data available for Paralogs for ENSG00000223398 Gene

Variants for ENSG00000223398 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000223398 Gene

Disorders for ENSG00000223398 Gene

No disorders were found for ENSG00000223398 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000223398 Gene

Publications for ENSG00000223398 Gene

No publications were found for ENSG00000223398 Gene.

Products for ENSG00000223398 Gene

Sources for ENSG00000223398 Gene

Content
Loading form....