Aliases for ENSG00000223374 Gene

Data sources for ENSG00000223374 Gene:

Subcategory (RNA class) for ENSG00000223374 Gene

lncRNA

Aliases for ENSG00000223374 Gene

External Ids for ENSG00000223374 Gene

Previous GeneCards Identifiers for ENSG00000223374 Gene

  • GC02M242290

Summaries for ENSG00000223374 Gene

GeneCards Summary for ENSG00000223374 Gene

ENSG00000223374 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000223374 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000223374 Gene

Genomics for ENSG00000223374 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for ENSG00000223374 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH02J241350 Enhancer 1.2 Ensembl ENCODE dbSUPER 250.7 +1.5 1467 2.1 MXD4 CEBPA HOMEZ KDM6A THAP11 RAD51 CUX1 FOXA2 ZNF511 SMAD4 ENSG00000223374 HDLBP FARP2 piR-43107-173 SEPTIN2
GH02J241616 Promoter/Enhancer 1.9 EPDnew Ensembl ENCODE dbSUPER 65.2 -265.7 -265729 4.5 ZBTB10 SIX5 NR2C1 ETS1 ZNF217 ZEB1 ELF1 THAP11 HCFC1 ZNF639 THAP4 ING5 ENSG00000223374 MTERF4 SNED1 ENSG00000235351 FARP2 BOK D2HGDH DTYMK
GH02J241313 Promoter/Enhancer 2.3 EPDnew Ensembl ENCODE CraniofacialAtlas dbSUPER 52.1 +36.5 36515 6 ZSCAN16 CHD2 TBP ZBTB10 MXD4 BCL11A SP1 FEZF1 CEBPA NR2C1 SEPTIN2 HDLBP HSALNG0023667 lnc-PASK-4 ENSG00000223374 ANKMY1 ATG4B FARP2 ENSG00000235351 DTYMK
GH02J240603 Promoter/Enhancer 1.8 EPDnew Ensembl ENCODE dbSUPER 51.9 +747.6 747603 3.4 MXD4 DEK CTCF BHLHE40 ELF1 ZIC2 HOMEZ THAP11 REST FOXA2 GPR35 ENSG00000223374 ANKMY1 FARP2 CAPN10 SNED1 lnc-ANKMY1-3 AQP12B
GH02J241355 Enhancer 0.3 Ensembl dbSUPER 250.7 -1.0 -996 0.2 ENSG00000223374 FARP2 SEPTIN2 HDLBP
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000223374 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for ENSG00000223374 Gene

Latest Assembly
chr2:241,351,339-241,353,105
(GRCh38/hg38)
Size:
1,767 bases
Orientation:
Minus strand

Previous Assembly
chr2:242,290,755-242,292,519
(GRCh37/hg19 by Ensembl)
Size:
1,765 bases
Orientation:
Minus strand

Genomic View for ENSG00000223374 Gene

Genes around ENSG00000223374 on UCSC Golden Path with GeneCards custom track
ENSG00000223374 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Cytogenetic band:
ENSG00000223374 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000223374 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000223374 Gene

Proteins for ENSG00000223374 Gene

Post-translational modifications for ENSG00000223374 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000223374 Gene

Domains & Families for ENSG00000223374 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000223374 Gene

Function for ENSG00000223374 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000223374 Gene

Localization for ENSG00000223374 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000223374 Gene

Pathways & Interactions for ENSG00000223374 Gene

PathCards logo

SuperPathways for ENSG00000223374 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ENSG00000223374 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000223374 Gene

Drugs & Compounds for ENSG00000223374 Gene

No Compound Related Data Available

Transcripts for ENSG00000223374 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for ENSG00000223374 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS00002A87F6_9606 lncRNA 442 3

Ensembl: ENST00000414896 (view in UCSC) ,

LNCipedia: lnc-HDLBP-1:1,

NONCODE: NONHSAT077920.2,

URS00009AE2E8_9606 lncRNA 442 2

LncBook: HSALNT0049902,

NONCODE: NONHSAT186545.1,

URS0001BD0BFF_9606 lncRNA 442 1

LncBook: HSALNT0049902,

ENSG00000223374 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000223374 Gene

No ASD Table

Relevant External Links for ENSG00000223374 Gene

GeneLoc Exon Structure for
ENSG00000223374

No data available for mRNA/cDNA for ENSG00000223374 Gene

Expression for ENSG00000223374 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ENSG00000223374 Gene

genes like me logo Genes that share expression patterns with ENSG00000223374: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000223374 Gene

Orthologs for ENSG00000223374 Gene

Evolution for ENSG00000223374 Gene

ENSEMBL:
Gene Tree for ENSG00000223374 (if available)
TreeFam:
Gene Tree for ENSG00000223374 (if available)

No data available for Orthologs for ENSG00000223374 Gene

Paralogs for ENSG00000223374 Gene

No data available for Paralogs for ENSG00000223374 Gene

Variants for ENSG00000223374 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , dbSNP identifiers (rs#s) for variants without ClinVar clinical significance , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000223374 Gene

Disorders for ENSG00000223374 Gene

Additional Disease Information for ENSG00000223374

Open Targets Platform
Open Targets Platform

No disorders were found for ENSG00000223374 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ENSG00000223374 Gene

Publications for ENSG00000223374 Gene

No publications were found for ENSG00000223374 Gene.

No data available for Mastermind for ENSG00000223374 Gene

Products for ENSG00000223374 Gene

Sources for ENSG00000223374 Gene