Aliases for ENSG00000223302 Gene

Subcategory (RNA class) for ENSG00000223302 Gene

misc_RNA

Aliases for ENSG00000223302 Gene

  • AL359260.1 5

External Ids for ENSG00000223302 Gene

Previous GeneCards Identifiers for ENSG00000223302 Gene

  • GC10M112394
  • GC10M112402

Summaries for ENSG00000223302 Gene

GeneCards Summary for ENSG00000223302 Gene

ENSG00000223302 is an RNA Gene, and is affiliated with the misc_RNA class.

Additional gene information for ENSG00000223302 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000223302 Gene

Genomics for ENSG00000223302 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for ENSG00000223302 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH10J110644 Promoter/Enhancer 1.7 EPDnew Ensembl ENCODE dbSUPER 600.7 -1.9 -1916 3.8 PRDM10 ZNF629 IKZF1 ZNF692 PRDM1 ZIC2 ZSCAN4 PKNOX1 POLR2A PATZ1 RBM20 ENSG00000223302 ADD3-AS1 piR-38736-003 PDCD4
GH10J110641 Enhancer 1.2 FANTOM5 ENCODE dbSUPER 600.7 +1.2 1248 0.3 PRDM10 ZNF629 LEF1 JUND PRDM1 ZIC2 PKNOX1 POLR2A PATZ1 REST RBM20 ENSG00000223302 SMC3 RF00017-803 lnc-BBIP1-6
GH10J110642 Promoter/Enhancer 0.9 Ensembl dbSUPER 600.7 +0.9 884 0.2 ZNF501 EZH2 ZSCAN5C FOSL1 ZNF189 ZNF837 ZFP37 ZNF133 ZNF148 ENSG00000223302 RBM20 RF00017-803 lnc-BBIP1-6 SMC3
GH10J110671 Promoter/Enhancer 1.6 FANTOM5 ENCODE CraniofacialAtlas dbSUPER 12.7 -29.6 -29554 1.3 GATAD2A CTCF HNRNPL BACH1 TARDBP LARP7 PRDM1 MTA2 ZNF143 ZIC2 ENSG00000223302 RBM20 SMNDC1 PDCD4 piR-38736-003
GH10J110664 Enhancer 1.3 Ensembl ENCODE dbSUPER 12.7 -22.5 -22516 1.4 PRDM10 ZNF629 LEF1 IKZF1 JUND MTA2 MTA1 ZNF24 BRD9 DPF2 SMC3 XPNPEP1 RBM20 ENSG00000223302 ADRA2A ENSG00000270589 SMNDC1 piR-38736-003 PDCD4
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000223302 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for ENSG00000223302 Gene

Genomic Locations for ENSG00000223302 Gene
chr10:110,642,678-110,642,785
(GRCh38/hg38)
Size:
108 bases
Orientation:
Minus strand
chr10:112,402,436-112,402,543
(GRCh37/hg19)
Size:
108 bases
Orientation:
Minus strand

Genomic View for ENSG00000223302 Gene

Genes around ENSG00000223302 on UCSC Golden Path with GeneCards custom track
ENSG00000223302 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
ENSG00000223302 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000223302 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000223302 Gene

Proteins for ENSG00000223302 Gene

Post-translational modifications for ENSG00000223302 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000223302 Gene

Domains & Families for ENSG00000223302 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000223302 Gene

Function for ENSG00000223302 Gene

Phenotypes From GWAS Catalog for ENSG00000223302 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000223302 Gene

Localization for ENSG00000223302 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000223302 Gene

Pathways & Interactions for ENSG00000223302 Gene

PathCards logo

SuperPathways for ENSG00000223302 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ENSG00000223302 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000223302 Gene

Drugs & Compounds for ENSG00000223302 Gene

No Compound Related Data Available

Transcripts for ENSG00000223302 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for ENSG00000223302 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS0000A82172_9606 Y_RNA 108 1

Ensembl: ENST00000411370 (view in UCSC) ,

ENSG00000223302 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000223302 Gene

No ASD Table

Relevant External Links for ENSG00000223302 Gene

GeneLoc Exon Structure for
ENSG00000223302

No data available for mRNA/cDNA for ENSG00000223302 Gene

Expression for ENSG00000223302 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ENSG00000223302 Gene

genes like me logo Genes that share expression patterns with ENSG00000223302: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000223302 Gene

Orthologs for ENSG00000223302 Gene

This gene was present in the common ancestor of human and mouse.

Orthologs for ENSG00000223302 Gene

Organism Taxonomy Gene Similarity Type Details
Chimpanzee
(Pan troglodytes)
Mammalia Y_RNA 31
  • 96 (a)
OneToOne
Mouse
(Mus musculus)
Mammalia Gm26168 31
  • 74 (a)
OneToOne
Species where no ortholog for ENSG00000223302 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Eremothecium gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • Alpha proteobacteria (Wolbachia pipientis)
  • Amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • Baker's yeast (Saccharomyces cerevisiae)
  • Barley (Hordeum vulgare)
  • Beta proteobacteria (Neisseria meningitidis)
  • Bread mold (Neurospora crassa)
  • Chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • Common water flea (Daphnia pulex)
  • Corn (Zea mays)
  • Cow (Bos Taurus)
  • Dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • Filamentous fungi (Aspergillus nidulans)
  • Firmicute Bacteria (Streptococcus pneumoniae)
  • Fission Yeast (Schizosaccharomyces pombe)
  • Fruit Fly (Drosophila melanogaster)
  • Green Algae (Chlamydomonas reinhardtii)
  • Honey Bee (Apis mellifera)
  • K. Lactis Yeast (Kluyveromyces lactis)
  • Lizard (Anolis carolinensis)
  • Loblloly Pine (Pinus taeda)
  • Malaria Parasite (Plasmodium falciparum)
  • Medicago Trunc (Medicago Truncatula)
  • Moss (Physcomitrella patens)
  • Oppossum (Monodelphis domestica)
  • Orangutan (Pongo pygmaeus)
  • Pig (Sus scrofa)
  • Platypus (Ornithorhynchus anatinus)
  • Rainbow Trout (Oncorhynchus mykiss)
  • Rat (Rattus norvegicus)
  • Rice (Oryza sativa)
  • Rice Blast Fungus (Magnaporthe grisea)
  • Schistosome Parasite (Schistosoma mansoni)
  • Sea Anemone (Nematostella vectensis)
  • Sea Vase (Ciona intestinalis)
  • Sea Squirt (Ciona savignyi)
  • Sea Urchin (Strongylocentrotus purpuratus)
  • Sorghum (Sorghum bicolor)
  • Soybean (Glycine max)
  • Stem Rust Fungus (Puccinia graminis)
  • Sugarcane (Saccharum officinarum)
  • Thale Cress (Arabidopsis thaliana)
  • Tomato (Lycopersicon esculentum)
  • Toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • Tropical Clawed Frog (Silurana tropicalis)
  • Wheat (Triticum aestivum)
  • Worm (Caenorhabditis elegans)
  • Zebrafish (Danio rerio)

Evolution for ENSG00000223302 Gene

ENSEMBL:
Gene Tree for ENSG00000223302 (if available)
TreeFam:
Gene Tree for ENSG00000223302 (if available)

Paralogs for ENSG00000223302 Gene

No data available for Paralogs for ENSG00000223302 Gene

Variants for ENSG00000223302 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000223302 Gene

Disorders for ENSG00000223302 Gene

No disorders were found for ENSG00000223302 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000223302 Gene

Publications for ENSG00000223302 Gene

No publications were found for ENSG00000223302 Gene.

No data available for Mastermind for ENSG00000223302 Gene

Products for ENSG00000223302 Gene

Sources for ENSG00000223302 Gene