Aliases for ENSG00000222072 Gene

Subcategory (RNA class) for ENSG00000222072 Gene

misc_RNA

Quality Score for this RNA gene is

11

Aliases for ENSG00000222072 Gene

  • RF00019 5

External Ids for ENSG00000222072 Gene

Previous GeneCards Identifiers for ENSG00000222072 Gene

  • GC10M102658

Summaries for ENSG00000222072 Gene

GeneCards Summary for ENSG00000222072 Gene

ENSG00000222072 is an RNA Gene, and is affiliated with the misc_RNA class.

Additional gene information for ENSG00000222072 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000222072 Gene

Genomics for ENSG00000222072 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000222072 Gene

Promoters and enhancers for ENSG00000222072 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH10J100907 Enhancer 1 Ensembl CraniofacialAtlas 750.6 -0.5 -520 0.8 NR2F6 HLF ZNF652 ELF3 CEBPG ZNF687 SP5 ZNF644 KAT8 IKZF1 ENSG00000222072 SEMA4G MIR608 ENSG00000272572 SLF2
GH10J100910 Enhancer 0.3 Ensembl 750.6 -1.4 -1421 0.2 ZNF121 ENSG00000222072 SEMA4G MIR608 SLF2
GH10J100909 Promoter/Enhancer 2.4 EPDnew Ensembl ENCODE CraniofacialAtlas dbSUPER 0.4 -5.2 -5243 6.6 SIN3A ZBTB40 SP1 SIX5 ZBTB6 MLX RBPJ POLR2A USF2 FOS ENSG00000272572 SLF2 MRPL43 TWNK CHUK PHBP9 SEMA4G MIR608 CWF19L1 ENSG00000236308
GH10J100880 Enhancer 1.3 Ensembl ENCODE CraniofacialAtlas dbSUPER 0.3 +24.7 24679 4.4 ZBTB6 TCF7L2 NR2F6 MIXL1 L3MBTL2 ZNF652 RERE ELF3 ZNF687 PPARG SLF2 PAX2 ENSG00000272572 BLOC1S2 SFXN3 ENSG00000222072 lnc-MRPL43-3
GH10J100889 Enhancer 1 Ensembl ENCODE dbSUPER 0.4 +16.6 16579 2.6 MYC L3MBTL2 MAX TEAD4 MAFK POLR2A RFX1 CTCF SP1 MGA SLF2 ENSG00000272572 ENSG00000222072 lnc-MRPL43-3
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000222072 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000222072 Gene

Genomic Locations for ENSG00000222072 Gene
chr10:100,907,174-100,907,280
(GRCh38/hg38)
Size:
107 bases
Orientation:
Minus strand
chr10:102,666,931-102,667,037
(GRCh37/hg19)
Size:
107 bases
Orientation:
Minus strand

Genomic View for ENSG00000222072 Gene

Genes around ENSG00000222072 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000222072 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000222072 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000222072 Gene

Proteins for ENSG00000222072 Gene

Post-translational modifications for ENSG00000222072 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000222072 Gene

Domains & Families for ENSG00000222072 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000222072 Gene

Function for ENSG00000222072 Gene

Phenotypes From GWAS Catalog for ENSG00000222072 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000222072 Gene

Localization for ENSG00000222072 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000222072 Gene

Pathways & Interactions for ENSG00000222072 Gene

PathCards logo

SuperPathways for ENSG00000222072 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ENSG00000222072 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ENSG00000222072 Gene

Drugs & Compounds for ENSG00000222072 Gene

No Compound Related Data Available

Transcripts for ENSG00000222072 Gene

mRNA/cDNA for ENSG00000222072 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
(1) RNACentral transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000222072 Gene

No ASD Table

Relevant External Links for ENSG00000222072 Gene

GeneLoc Exon Structure for
ENSG00000222072

Expression for ENSG00000222072 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ENSG00000222072 Gene

genes like me logo Genes that share expression patterns with ENSG00000222072: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000222072 Gene

Orthologs for ENSG00000222072 Gene

This gene was present in the common ancestor of chordates.

Orthologs for ENSG00000222072 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia Y_RNA 33
  • 99 (a)
OneToOne
platypus
(Ornithorhynchus anatinus)
Mammalia Y_RNA 33
  • 52 (a)
ManyToMany
chicken
(Gallus gallus)
Aves Y_RNA 33
  • 51 (a)
OneToMany
lizard
(Anolis carolinensis)
Reptilia Y_RNA 33
  • 54 (a)
OneToMany
Species where no ortholog for ENSG00000222072 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for ENSG00000222072 Gene

ENSEMBL:
Gene Tree for ENSG00000222072 (if available)
TreeFam:
Gene Tree for ENSG00000222072 (if available)

Paralogs for ENSG00000222072 Gene

No data available for Paralogs for ENSG00000222072 Gene

Variants for ENSG00000222072 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000222072 Gene

Disorders for ENSG00000222072 Gene

No disorders were found for ENSG00000222072 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000222072 Gene

Publications for ENSG00000222072 Gene

No publications were found for ENSG00000222072 Gene.

No data available for External Links for ENSG00000222072 Gene

Products for ENSG00000222072 Gene

Sources for ENSG00000222072 Gene