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Aliases for ENSG00000221461 Gene

Subcategory (RNA class) for ENSG00000221461 Gene

snoRNA

Quality Score for this RNA gene is

1

Aliases for ENSG00000221461 Gene

  • Small Nucleolar RNA U3 5
  • U3 5

External Ids for ENSG00000221461 Gene

ORGUL Members for ENSG00000221461 Gene

Previous GeneCards Identifiers for ENSG00000221461 Gene

  • GC08M124263
  • GC08M124193
  • GC08M124195
  • GC08M124198
  • GC08M124201

Summaries for ENSG00000221461 Gene

GeneCards Summary for ENSG00000221461 Gene

ENSG00000221461 is an RNA Gene, and is affiliated with the snoRNA class.

Additional gene information for ENSG00000221461 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ENSG00000221461 Gene

Genomics for ENSG00000221461 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000221461 Gene

Promoters and enhancers for ENSG00000221461 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH08I123178 Promoter/Enhancer 1.8 EPDnew Ensembl ENCODE dbSUPER 550.8 +1.1 1100 2.7 PKNOX1 ATF1 ZNF280A TCF12 ZNF766 GATA2 ATF7 CAVIN1 NCOA1 ZNF592 FAM83A ENSG00000221461 GC08M123182 FAM83A-AS1 WDYHV1
GH08I123148 Enhancer 1 ENCODE dbSUPER 11.1 +31.2 31241 1.4 TAF9B INSM2 TCF12 FOS ATF7 CREM ZBTB2 ZEB2 MTA1 SMARCA4 FAM83A FAM83A-AS1 ENSG00000221461 ENSG00000253258 DERL1 TBC1D31 ENSG00000238901 ENSG00000253607 RNU6-875P MIR548AA1
GH08I123216 Enhancer 0.8 ENCODE 10.2 -36.9 -36884 1.8 PKNOX1 FOXA2 BRCA1 RAD21 RARA YY1 ELK1 RCOR1 FOS ELK4 MIR4663 GC08P123216 FAM83A ENSG00000253258 ENSG00000221461 UBA52P5
GH08I123220 Enhancer 0.7 ENCODE 11.1 -40.3 -40281 0.2 CTCF NFATC3 ARNT ARID4B MZF1 SIN3A RAD21 RFX5 CC2D1A SMC3 FAM83A ENSG00000253258 ENSG00000221461 GC08P123216 UBA52P5 C8orf76
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around ENSG00000221461 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000221461 Gene

Genomic Locations for ENSG00000221461 Gene
chr8:123,180,310-123,180,525
(GRCh38/hg38)
Size:
216 bases
Orientation:
Minus strand
chr8:124,192,551-124,192,765
(GRCh37/hg19)

Genomic View for ENSG00000221461 Gene

Genes around ENSG00000221461 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000221461 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000221461 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000221461 Gene

Proteins for ENSG00000221461 Gene

Post-translational modifications for ENSG00000221461 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000221461 Gene

Domains & Families for ENSG00000221461 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ENSG00000221461 Gene

Function for ENSG00000221461 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000221461 Gene

Localization for ENSG00000221461 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000221461 Gene

Pathways & Interactions for ENSG00000221461 Gene

SuperPathways for ENSG00000221461 Gene

No Data Available

Interacting Proteins for ENSG00000221461 Gene

Gene Ontology (GO) - Biological Process for ENSG00000221461 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ENSG00000221461 Gene

Drugs & Compounds for ENSG00000221461 Gene

No Compound Related Data Available

Transcripts for ENSG00000221461 Gene

mRNA/cDNA for ENSG00000221461 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000221461 Gene

No ASD Table

Relevant External Links for ENSG00000221461 Gene

GeneLoc Exon Structure for
ENSG00000221461

Expression for ENSG00000221461 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ENSG00000221461 Gene

mRNA differential expression in normal tissues according to GTEx for ENSG00000221461 Gene

This gene is overexpressed in Esophagus - Mucosa (x23.4), Vagina (x13.1), Cervix - Ectocervix (x7.0), and Minor Salivary Gland (x5.1).
genes like me logo Genes that share expression patterns with ENSG00000221461: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000221461 Gene

Orthologs for ENSG00000221461 Gene

This gene was present in the common ancestor of chordates.

Orthologs for ENSG00000221461 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia U3 34
  • 97 (a)
OneToOne
oppossum
(Monodelphis domestica)
Mammalia U3 34 34 34 34 34 34 34 34 34
  • 69 (a)
ManyToMany
platypus
(Ornithorhynchus anatinus)
Mammalia U3 34 34 34 34 34 34 34 34
  • 52 (a)
ManyToMany
chicken
(Gallus gallus)
Aves U3 34 34 34
  • 60 (a)
ManyToMany
lizard
(Anolis carolinensis)
Reptilia U3 34
  • 59 (a)
OneToMany
Species where no ortholog for ENSG00000221461 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for ENSG00000221461 Gene

ENSEMBL:
Gene Tree for ENSG00000221461 (if available)
TreeFam:
Gene Tree for ENSG00000221461 (if available)

Paralogs for ENSG00000221461 Gene

No data available for Paralogs for ENSG00000221461 Gene

Variants for ENSG00000221461 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000221461 Gene

Disorders for ENSG00000221461 Gene

No disorders were found for ENSG00000221461 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000221461 Gene

Publications for ENSG00000221461 Gene

No publications were found for ENSG00000221461 Gene.

Products for ENSG00000221461 Gene

Sources for ENSG00000221461 Gene

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