Aliases for ENSG00000221398 Gene

Subcategory (RNA class) for ENSG00000221398 Gene

snoRNA

Number of RNA Genes sources:

2 / 14

Aliases for ENSG00000221398 Gene

  • AP000324.1 5
  • SNORA11E 174
  • RF00614 172

External Ids for ENSG00000221398 Gene

Previous GeneCards Identifiers for ENSG00000221398 Gene

  • GC21M034750
  • GC21M035828

Summaries for ENSG00000221398 Gene

GeneCards Summary for ENSG00000221398 Gene

ENSG00000221398 is an RNA Gene, and is affiliated with the snoRNA class.

Rfam classification for ENSG00000221398 Gene

  • Small nucleolar RNA SNORA11

Additional gene information for ENSG00000221398 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for ENSG00000221398 Gene

Genomics for ENSG00000221398 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000221398 Gene

Promoters and enhancers for ENSG00000221398 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH21J034455 Enhancer 0.7 Ensembl ENCODE 500.7 +0.1 67 1.3 MYC MAX JUN JUND BHLHE40 L3MBTL2 GATA1 MGA ENSG00000221398 SMIM34A KCNE1 ENSG00000225555 SMIM11A KCNE2 RCAN1 FAM243A lnc-SMIM34A-1 HSALNG0132850
GH21J034482 Enhancer 1 Ensembl ENCODE 12.3 -27.2 -27169 1.8 CTCF ZBTB11 EP300 CTBP1 JUN MEF2A OSR2 NCOR1 NFIC FOSL1 KCNE1 ENSG00000221398 SMIM34A RCAN1 FAM243A LINC01426 lnc-SMIM34A-1 lnc-RCAN1-2
GH21J034486 Enhancer 0.4 Ensembl 12.1 -29.9 -29864 0.2 GATA3 IRF4 JUNB KCNE1 ENSG00000221398 RCAN1 FAM243A lnc-RCAN1-2 lnc-SMIM34A-1
GH21J034459 Promoter 1.3 EPDnew Ensembl CraniofacialAtlas 0.7 -3.3 -3264 1 TCF7 EGR1 KLF1 TCF7L2 EZH2 SP3 SUZ12 KCNE1 lnc-SMIM34A-1 ENSG00000225555 SMIM11A KCNE2 SMIM34A RCAN1 FAM243A ENSG00000221398
GH21J034445 Enhancer 0.8 VISTA Ensembl ENCODE 0.4 +9.0 9017 3.6 USF1 BHLHE40 ATF2 TRIM28 HNRNPL ZNF512 USF2 SMIM34A KCNE1 RCAN1 FAM243A HSALNG0132850 ENSG00000221398
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000221398 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000221398 Gene

Genomic Locations for ENSG00000221398 Gene
chr21:34,456,110-34,456,237
(GRCh38/hg38)
Size:
128 bases
Orientation:
Minus strand
chr21:35,828,408-35,828,535
(GRCh37/hg19)
Size:
128 bases
Orientation:
Minus strand

Genomic View for ENSG00000221398 Gene

Genes around ENSG00000221398 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000221398 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000221398 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000221398 Gene

Proteins for ENSG00000221398 Gene

Post-translational modifications for ENSG00000221398 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000221398 Gene

Domains & Families for ENSG00000221398 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000221398 Gene

Function for ENSG00000221398 Gene

Phenotypes From GWAS Catalog for ENSG00000221398 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000221398 Gene

Localization for ENSG00000221398 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000221398 Gene

Pathways & Interactions for ENSG00000221398 Gene

PathCards logo

SuperPathways for ENSG00000221398 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for ENSG00000221398 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000221398 Gene

Drugs & Compounds for ENSG00000221398 Gene

No Compound Related Data Available

Transcripts for ENSG00000221398 Gene

mRNA/cDNA for ENSG00000221398 Gene

1 RNACentral transcripts :
2 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
1 Rfam transcripts :
1 snOPY transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000221398 Gene

No ASD Table

Relevant External Links for ENSG00000221398 Gene

GeneLoc Exon Structure for
ENSG00000221398

Expression for ENSG00000221398 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ENSG00000221398 Gene

genes like me logo Genes that share expression patterns with ENSG00000221398: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000221398 Gene

Orthologs for ENSG00000221398 Gene

This gene was present in the common ancestor of mammals.

Orthologs for ENSG00000221398 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia SNORA11 31
  • 99 (a)
OneToOne
cow
(Bos Taurus)
Mammalia SNORA11 31 31
  • 74 (a)
ManyToMany
mouse
(Mus musculus)
Mammalia Gm22488 31
  • 72 (a)
OneToMany
Species where no ortholog for ENSG00000221398 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for ENSG00000221398 Gene

ENSEMBL:
Gene Tree for ENSG00000221398 (if available)
TreeFam:
Gene Tree for ENSG00000221398 (if available)

Paralogs for ENSG00000221398 Gene

No data available for Paralogs for ENSG00000221398 Gene

Variants for ENSG00000221398 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000221398 Gene

Disorders for ENSG00000221398 Gene

No disorders were found for ENSG00000221398 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000221398 Gene

Publications for ENSG00000221398 Gene

No publications were found for ENSG00000221398 Gene.

No data available for Mastermind for ENSG00000221398 Gene

Products for ENSG00000221398 Gene

Sources for ENSG00000221398 Gene