Aliases for ENSG00000218809 Gene

Aliases for ENSG00000218809 Gene

  • Triggering Receptor Expressed On Myeloid Cells 1 (TREM1) Pseudogene 5
  • AL391903.1 5

External Ids for ENSG00000218809 Gene

Previous GeneCards Identifiers for ENSG00000218809 Gene

  • GC06M041345
  • GC06M041237

Summaries for ENSG00000218809 Gene

GeneCards Summary for ENSG00000218809 Gene

ENSG00000218809 is a Pseudogene.

Additional gene information for ENSG00000218809 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000218809 Gene

Genomics for ENSG00000218809 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000218809 Gene

Promoters and enhancers for ENSG00000218809 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH06J041273 Enhancer 1 FANTOM5 ENCODE dbSUPER 500.7 -1.9 -1851 0.8 CREB1 CTCF SPI1 GABPA ZFP64 POLR2A MYC MAX SP1 ENSG00000218809 lnc-TREML2-4 TREM1 TREML4 TREML3P NFYA TFEB TREML2 TREML1 lnc-TREML2-2
GH06J041269 Enhancer 0.5 FANTOM5 dbSUPER 500.7 +0.9 891 0.4 ATF3 ENSG00000218809 TREM1 NFYA TREML4 TREML2 TFEB ENSG00000278745
GH06J041198 Promoter/Enhancer 1.8 EPDnew Ensembl ENCODE dbSUPER 5 +68.8 68809 6.2 ZBTB40 PHB2 ZNF263 RFX1 CTBP1 POLR2A NCOR1 NFRKB MBD2 TCF12 TREML2 TREML4 TREML3P TREM2 USP49 ADCY10P1 NFYA TAF8 TREML5P TREML1
GH06J041208 Enhancer 0.8 Ensembl ENCODE dbSUPER 4.9 +60.5 60479 3.3 NR2C1 GABPA GABPB1 SPI1 ZNF687 IKZF1 NR2C2 TREM2 TREML3P TREML5P ENSG00000218809 TREML2
GH06J041247 Enhancer 0.6 FANTOM5 Ensembl 4.8 +21.8 21786 2.7 MEF2B NR2F1 GATAD2B TREML5P lnc-TREM1-3 lnc-TREML4-1 TREML4 TREML3P TREM1 NFYA TFEB ENSG00000218809 TREML2
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000218809 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000218809 Gene

Genomic Locations for ENSG00000218809 Gene
chr6:41,269,875-41,270,239
(GRCh38/hg38)
Size:
365 bases
Orientation:
Minus strand
chr6:41,237,613-41,237,977
(GRCh37/hg19)
Size:
365 bases
Orientation:
Minus strand

Genomic View for ENSG00000218809 Gene

Genes around ENSG00000218809 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000218809 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000218809 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000218809 Gene

Proteins for ENSG00000218809 Gene

Post-translational modifications for ENSG00000218809 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000218809 Gene

Domains & Families for ENSG00000218809 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000218809 Gene

Function for ENSG00000218809 Gene

Phenotypes From GWAS Catalog for ENSG00000218809 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000218809 Gene

Localization for ENSG00000218809 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000218809 Gene

Pathways & Interactions for ENSG00000218809 Gene

PathCards logo

SuperPathways for ENSG00000218809 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for ENSG00000218809 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000218809 Gene

Drugs & Compounds for ENSG00000218809 Gene

No Compound Related Data Available

Transcripts for ENSG00000218809 Gene

mRNA/cDNA for ENSG00000218809 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000218809 Gene

No ASD Table

Relevant External Links for ENSG00000218809 Gene

GeneLoc Exon Structure for
ENSG00000218809

Expression for ENSG00000218809 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ENSG00000218809 Gene

mRNA differential expression in normal tissues according to GTEx for ENSG00000218809 Gene

This gene is overexpressed in Whole Blood (x42.6).
genes like me logo Genes that share expression patterns with ENSG00000218809: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000218809 Gene

Orthologs for ENSG00000218809 Gene

Evolution for ENSG00000218809 Gene

ENSEMBL:
Gene Tree for ENSG00000218809 (if available)
TreeFam:
Gene Tree for ENSG00000218809 (if available)

No data available for Orthologs for ENSG00000218809 Gene

Paralogs for ENSG00000218809 Gene

No data available for Paralogs for ENSG00000218809 Gene

Variants for ENSG00000218809 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000218809 Gene

Disorders for ENSG00000218809 Gene

No disorders were found for ENSG00000218809 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000218809 Gene

Publications for ENSG00000218809 Gene

No publications were found for ENSG00000218809 Gene.

No data available for Mastermind for ENSG00000218809 Gene

Products for ENSG00000218809 Gene

Sources for ENSG00000218809 Gene