Aliases for ENSG00000217576 Gene

Subcategory (RNA class) for ENSG00000217576 Gene

lncRNA

Number of RNA Genes sources:

3 / 14

Aliases for ENSG00000217576 Gene

  • Novel Transcript 5
  • NONHSAG013569 92
  • HSALNG0097248 167
  • HSALNG0097250 167
  • NONHSAG013571 92
  • AL158066.1 5
  • Lnc-NEK3-1 168

External Ids for ENSG00000217576 Gene

Previous GeneCards Identifiers for ENSG00000217576 Gene

  • GC13M051695
  • GC13M052741

Summaries for ENSG00000217576 Gene

GeneCards Summary for ENSG00000217576 Gene

ENSG00000217576 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000217576 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000217576 Gene

Genomics for ENSG00000217576 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000217576 Gene

Promoters and enhancers for ENSG00000217576 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH13J052193 Promoter/Enhancer 2.1 FANTOM5 Ensembl ENCODE CraniofacialAtlas dbSUPER 0.2 +97.1 97057 3.4 FOXK2 ZBTB40 ZNF217 EP300 ZSCAN5C SIN3A USF1 POLR2G SP1 GTF2E2 MRPS31P5 SUGT1 CKAP2 UTP14C ALG11 INTS6-AS1 INTS6 TPTE2P2 RPS4XP16 NEK5
GH13J052186 Enhancer 1.2 Ensembl ENCODE dbSUPER 0.1 +103.5 103520 2.3 TCF7 RFX1 REST HES1 TOE1 CTBP1 MYC TBX3 NCOR1 NFIC NEK3 NEK5 CCDC70 ALG11 VPS36 ATP7B DHRS12 ENSG00000231856 TPTE2P3 MRPS31P5
GH13J052201 Enhancer 1 Ensembl ENCODE dbSUPER 0.2 +90.1 90056 1.4 CTCF RAD21 TEAD1 SMC3 TFDP1 SAP130 MXD4 ZGPAT ZNF654 SCRT1 TPTE2P2 MRPS31P5 piR-45291-001 ENSG00000217576
GH13J052203 Enhancer 0.8 Ensembl ENCODE 0.2 +87.7 87656 3 ZSCAN5C TRIM24 CEBPG CEBPB ZNF335 ZNF318 ATF4 MEIS2 IRF9 ZFP69B VPS36 TPTE2P2 ATP7B MRPS31P5 piR-45291-001 ENSG00000217576
GH13J052210 Enhancer 0.8 Ensembl ENCODE 0.2 +80.1 80143 1.4 ZNF217 CLOCK CUX1 CTBP1 SIN3A MLLT1 JUND GATA3 PKNOX1 DPF2 CKAP2 TPTE2P2 CCDC70 TPTE2P3 piR-45291-001 MRPS31P5 ENSG00000217576
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000217576 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000217576 Gene

Genomic Locations for ENSG00000217576 Gene
chr13:52,167,709-52,291,557
(GRCh38/hg38)
Size:
123,849 bases
Orientation:
Minus strand
chr13:52,741,844-52,865,692
(GRCh37/hg19)
Size:
123,849 bases
Orientation:
Minus strand

Genomic View for ENSG00000217576 Gene

Genes around ENSG00000217576 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000217576 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000217576 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000217576 Gene

Proteins for ENSG00000217576 Gene

Post-translational modifications for ENSG00000217576 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000217576 Gene

Domains & Families for ENSG00000217576 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000217576 Gene

Function for ENSG00000217576 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000217576 Gene

Localization for ENSG00000217576 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000217576 Gene

Pathways & Interactions for ENSG00000217576 Gene

PathCards logo

SuperPathways for ENSG00000217576 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for ENSG00000217576 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000217576 Gene

Drugs & Compounds for ENSG00000217576 Gene

No Compound Related Data Available

Transcripts for ENSG00000217576 Gene

mRNA/cDNA for ENSG00000217576 Gene

19 RNACentral transcripts :
1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
17 NONCODE transcripts :
14 LncBook transcripts :
17 LNCipedia transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000217576 Gene

No ASD Table

Relevant External Links for ENSG00000217576 Gene

GeneLoc Exon Structure for
ENSG00000217576

Expression for ENSG00000217576 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000217576 Gene

Orthologs for ENSG00000217576 Gene

Evolution for ENSG00000217576 Gene

ENSEMBL:
Gene Tree for ENSG00000217576 (if available)
TreeFam:
Gene Tree for ENSG00000217576 (if available)

No data available for Orthologs for ENSG00000217576 Gene

Paralogs for ENSG00000217576 Gene

No data available for Paralogs for ENSG00000217576 Gene

Variants for ENSG00000217576 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000217576 Gene

Disorders for ENSG00000217576 Gene

No disorders were found for ENSG00000217576 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000217576 Gene

Publications for ENSG00000217576 Gene

No publications were found for ENSG00000217576 Gene.

No data available for Mastermind for ENSG00000217576 Gene

Products for ENSG00000217576 Gene

Sources for ENSG00000217576 Gene