Aliases for ENSG00000213939 Gene

Aliases for ENSG00000213939 Gene

  • Ribosomal Protein S12 (RPS12) Pseudogene 5
  • AC091153.1 5

External Ids for ENSG00000213939 Gene

Previous GeneCards Identifiers for ENSG00000213939 Gene

  • GC17M004556
  • GC17M004608

Summaries for ENSG00000213939 Gene

GeneCards Summary for ENSG00000213939 Gene

ENSG00000213939 is a Pseudogene.

Additional gene information for ENSG00000213939 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000213939 Gene

Genomics for ENSG00000213939 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000213939 Gene

Promoters and enhancers for ENSG00000213939 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH17J004703 Promoter/Enhancer 2 EPDnew Ensembl ENCODE CraniofacialAtlas 500.7 +1.3 1316 3 ZBTB40 ZNF217 EP300 NRF1 TCF12 MYC USF1 POLR2G PHF8 ZFX ENSG00000213939 LOC101559451 PELP1 RPS12P29 lnc-CXCL16-3 lnc-PELP1-2 ARRB2 DERL2 ZFP3 lnc-CXCL16-4
GH17J004706 Enhancer 0.6 Ensembl ENCODE 500.7 -1.1 -1084 1 GLI4 ZNF449 ZNF770 ENSG00000213939 PELP1 RPS12P29 lnc-PELP1-2 ARRB2 piR-31470-227
GH17J004856 Promoter/Enhancer 1.5 Ensembl ENCODE CraniofacialAtlas dbSUPER 12.1 -153.6 -153559 5.3 JUND POLR2A KDM6A TCF7 CTBP1 MXI1 KMT2B SAP130 TCF12 GABPB1 ATP6V0CP1 CHRNE C17orf107 ZFP3 MINK1 PLD2 ARRB2 ENSG00000213939 LOC101559451 PELP1
GH17J004843 Promoter/Enhancer 1.1 FANTOM5 Ensembl ENCODE dbSUPER 11.7 -139.6 -139612 2.2 NFE2 SPI1 ARRB2 ZMYND15 CXCL16 C17orf107 PLD2 PSMB6 GLTPD2 VMO1 ENSG00000213939 LOC101559451
GH17J004847 Enhancer 1.1 FANTOM5 ENCODE dbSUPER 11.7 -144.4 -144415 4.4 TCF12 POLR2A KLF4 CUX1 EP300 RCOR1 NR3C1 STAT3 MAX PKNOX1 lnc-CHRNE-4 CHRNE ENO3 PFN1 ZMYND15 ARRB2 C17orf107 PLD2 CXCL16 LOC101559451
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000213939 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000213939 Gene

Genomic Locations for ENSG00000213939 Gene
chr17:4,704,816-4,705,217
(GRCh38/hg38)
Size:
402 bases
Orientation:
Minus strand

Genomic View for ENSG00000213939 Gene

Genes around ENSG00000213939 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000213939 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000213939 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000213939 Gene

Proteins for ENSG00000213939 Gene

Post-translational modifications for ENSG00000213939 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000213939 Gene

Domains & Families for ENSG00000213939 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000213939 Gene

Function for ENSG00000213939 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000213939 Gene

Localization for ENSG00000213939 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000213939 Gene

Pathways & Interactions for ENSG00000213939 Gene

PathCards logo

SuperPathways for ENSG00000213939 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for ENSG00000213939 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000213939 Gene

Drugs & Compounds for ENSG00000213939 Gene

No Compound Related Data Available

Transcripts for ENSG00000213939 Gene

mRNA/cDNA for ENSG00000213939 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000213939 Gene

No ASD Table

Relevant External Links for ENSG00000213939 Gene

GeneLoc Exon Structure for
ENSG00000213939

Expression for ENSG00000213939 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000213939 Gene

Orthologs for ENSG00000213939 Gene

Evolution for ENSG00000213939 Gene

ENSEMBL:
Gene Tree for ENSG00000213939 (if available)
TreeFam:
Gene Tree for ENSG00000213939 (if available)

No data available for Orthologs for ENSG00000213939 Gene

Paralogs for ENSG00000213939 Gene

No data available for Paralogs for ENSG00000213939 Gene

Variants for ENSG00000213939 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000213939 Gene

Disorders for ENSG00000213939 Gene

No disorders were found for ENSG00000213939 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000213939 Gene

Publications for ENSG00000213939 Gene

No publications were found for ENSG00000213939 Gene.

No data available for Mastermind for ENSG00000213939 Gene

Products for ENSG00000213939 Gene

Sources for ENSG00000213939 Gene