Aliases for ENSG00000213062 Gene

Subcategory (RNA class) for ENSG00000213062 Gene

lncRNA

Number of RNA Genes sources:

3 / 17

Aliases for ENSG00000213062 Gene

  • Novel Transcript 5
  • NONHSAG003413.2 91
  • NONHSAG003414.2 91
  • HSALNG0008334 164
  • Lnc-BLZF1-2 165
  • Z99572.1 5

External Ids for ENSG00000213062 Gene

Previous GeneCards Identifiers for ENSG00000213062 Gene

  • GC01P167722

Summaries for ENSG00000213062 Gene

GeneCards Summary for ENSG00000213062 Gene

ENSG00000213062 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000213062 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000213062 Gene

Genomics for ENSG00000213062 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for ENSG00000213062 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J169482 Promoter/Enhancer 2.4 EPDnew Ensembl ENCODE CraniofacialAtlas dbSUPER 608.2 -0.9 -876 6.4 SP1 HNRNPL CREB1 GATAD2A ATF7 PRDM10 REST ZNF629 TFE3 SOX13 ENSG00000213062 SLC19A2 SCYL3 RN7SL333P C1orf112 METTL18 NME7 CCDC181 piR-38611
GH01J169508 Enhancer 1 Ensembl ENCODE 12.4 +23.2 23225 2.2 GATAD2A ZNF512 LEF1 MTA2 RXRB MTA1 ZNF24 DPF2 HDAC1 GABPA SLC19A2 SCYL3 ENSG00000213062 C1orf112 piR-61514-024 piR-56133-011 F5
GH01J169539 Enhancer 0.8 Ensembl ENCODE 12.1 +53.1 53125 1.2 CREB1 JUND CEBPB CTBP1 FOS JUN RCOR1 PKNOX1 GTF2F1 RBM22 NONHSAG003415.2 ENSG00000213062 SLC19A2 NME7 piR-56133-011 F5
GH01J169526 Enhancer 0.8 ENCODE 12.2 +42.7 42695 3.7 CREB1 TEAD4 TARDBP ZHX2 JUND FOXA1 PRDM1 HDAC1 SOX6 ATF7 SLC19A2 ENSG00000213062 NME7 F5 piR-56133-011 piR-61514-024
GH01J169511 Enhancer 0.8 Ensembl ENCODE 12 +25.5 25525 2 CEBPB FOS JUN YY1 RBM22 JUND FOSL1 CUX1 EP300 FOSL2 SLC19A2 ENSG00000213062 CCDC181 NME7 piR-61514-024 piR-56133-011 F5
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000213062 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for ENSG00000213062 Gene

Genomic Locations for ENSG00000213062 Gene
chr1:169,486,076-169,500,182
(GRCh38/hg38)
Size:
14,107 bases
Orientation:
Plus strand
chr1:169,455,380-169,456,846
(GRCh37/hg19)
Size:
1,467 bases
Orientation:
Plus strand

Genomic View for ENSG00000213062 Gene

Genes around ENSG00000213062 on UCSC Golden Path with GeneCards custom track
ENSG00000213062 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
ENSG00000213062 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000213062 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000213062 Gene

Proteins for ENSG00000213062 Gene

Post-translational modifications for ENSG00000213062 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000213062 Gene

Domains & Families for ENSG00000213062 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000213062 Gene

Function for ENSG00000213062 Gene

Phenotypes From GWAS Catalog for ENSG00000213062 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000213062 Gene

Localization for ENSG00000213062 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000213062 Gene

Pathways & Interactions for ENSG00000213062 Gene

PathCards logo

SuperPathways for ENSG00000213062 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ENSG00000213062 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000213062 Gene

Drugs & Compounds for ENSG00000213062 Gene

No Compound Related Data Available

Transcripts for ENSG00000213062 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for ENSG00000213062 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS0000EF1E01_9606 lncRNA 14107 1

Ensembl: ENST00000392097 (view in UCSC) ,

URS00008B4F1A_9606 lncRNA 3062 2

LNCipedia: lnc-BLZF1-2:1,

NONCODE: NONHSAT007465.2,

URS00008B51A4_9606 lncRNA 1058 2

LNCipedia: lnc-BLZF1-2:5,

NONCODE: NONHSAT007466.2,

URS00007715F1_9606 lncRNA 911 2

LncBook: HSALNT0017256,

LNCipedia: lnc-BLZF1-2:3,

URS0000D5D43D_9606 lncRNA 3855 1

LNCipedia: lnc-BLZF1-2:4,

ENSG00000213062 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000213062 Gene

No ASD Table

Relevant External Links for ENSG00000213062 Gene

GeneLoc Exon Structure for
ENSG00000213062

No data available for mRNA/cDNA for ENSG00000213062 Gene

Expression for ENSG00000213062 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ENSG00000213062 Gene

genes like me logo Genes that share expression patterns with ENSG00000213062: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000213062 Gene

Orthologs for ENSG00000213062 Gene

Evolution for ENSG00000213062 Gene

ENSEMBL:
Gene Tree for ENSG00000213062 (if available)
TreeFam:
Gene Tree for ENSG00000213062 (if available)

No data available for Orthologs for ENSG00000213062 Gene

Paralogs for ENSG00000213062 Gene

No data available for Paralogs for ENSG00000213062 Gene

Variants for ENSG00000213062 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000213062 Gene

Disorders for ENSG00000213062 Gene

Additional Disease Information for ENSG00000213062

No disorders were found for ENSG00000213062 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ENSG00000213062 Gene

Publications for ENSG00000213062 Gene

No publications were found for ENSG00000213062 Gene.

No data available for Mastermind for ENSG00000213062 Gene

Products for ENSG00000213062 Gene

Sources for ENSG00000213062 Gene