Aliases for ENSG00000212939 Gene

Subcategory (RNA class) for ENSG00000212939 Gene

lncRNA

Number of RNA Genes sources:

2 / 14

Aliases for ENSG00000212939 Gene

  • Novel Transcript 5
  • NONHSAG034213 92
  • Lnc-ZBED4-2 168
  • Z97192.1 5

External Ids for ENSG00000212939 Gene

Previous GeneCards Identifiers for ENSG00000212939 Gene

  • GC22P049942

Summaries for ENSG00000212939 Gene

GeneCards Summary for ENSG00000212939 Gene

ENSG00000212939 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000212939 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000212939 Gene

Genomics for ENSG00000212939 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000212939 Gene

Promoters and enhancers for ENSG00000212939 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH22J049549 Enhancer 0.7 Ensembl ENCODE 500.7 +0.2 194 1 ZNF217 CTCF TCF12 FOXA1 EZH2 RAD21 ZNF143 FOXA2 ENSG00000212939 piR-40341 ENSG00000235111 piR-49105 C22orf34
GH22J049656 Promoter/Enhancer 1.2 Ensembl ENCODE 9.5 +109.3 109261 4.3 ZBTB11 AFF1 MYC RCOR1 CTBP1 PRPF4 NFRKB POLR2A TAF9B ZNF341 C22orf34 ENSG00000235111 HDAC10 CHKB ENSG00000212939 piR-36981
GH22J049460 Enhancer 0.7 Ensembl CraniofacialAtlas 11.3 -87.8 -87805 1.4 ZNF341 OSR2 NFIC ZBTB17 ZBTB48 PRDM6 INSM2 ZNF449 ENSG00000212939 lnc-BRD1-7 RF00017-3884 C22orf34
GH22J049502 Enhancer 0.6 Ensembl 11.3 -46.4 -46380 1.4 FOSL2 FOSL1 NR2F1 JUND NR2F6 POLR2A MYC JUN MAX ELF3 ENSG00000280224 ENSG00000212939 LOC105373087 ENSG00000279597 C22orf34
GH22J049349 Enhancer 0.3 Ensembl 10.4 -198.8 -198780 0.2 NRF1 NR2F2 HSALNG0136185 ENSG00000212939 HSALNG0136184
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000212939 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000212939 Gene

Genomic Locations for ENSG00000212939 Gene
chr22:49,548,681-49,556,473
(GRCh38/hg38)
Size:
7,793 bases
Orientation:
Plus strand
chr22:49,942,329-49,950,121
(GRCh37/hg19)
Size:
7,793 bases
Orientation:
Plus strand

Genomic View for ENSG00000212939 Gene

Genes around ENSG00000212939 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000212939 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000212939 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000212939 Gene

Proteins for ENSG00000212939 Gene

Post-translational modifications for ENSG00000212939 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000212939 Gene

Domains & Families for ENSG00000212939 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000212939 Gene

Function for ENSG00000212939 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000212939 Gene

Localization for ENSG00000212939 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000212939 Gene

Pathways & Interactions for ENSG00000212939 Gene

PathCards logo

SuperPathways for ENSG00000212939 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for ENSG00000212939 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000212939 Gene

Drugs & Compounds for ENSG00000212939 Gene

No Compound Related Data Available

Transcripts for ENSG00000212939 Gene

mRNA/cDNA for ENSG00000212939 Gene

1 RNACentral transcripts :
1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
1 NONCODE transcripts :
1 LNCipedia transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000212939 Gene

No ASD Table

Relevant External Links for ENSG00000212939 Gene

GeneLoc Exon Structure for
ENSG00000212939

Expression for ENSG00000212939 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ENSG00000212939 Gene

mRNA differential expression in normal tissues according to GTEx for ENSG00000212939 Gene

This gene is overexpressed in Bladder (x19.0).
genes like me logo Genes that share expression patterns with ENSG00000212939: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000212939 Gene

Orthologs for ENSG00000212939 Gene

Evolution for ENSG00000212939 Gene

ENSEMBL:
Gene Tree for ENSG00000212939 (if available)
TreeFam:
Gene Tree for ENSG00000212939 (if available)

No data available for Orthologs for ENSG00000212939 Gene

Paralogs for ENSG00000212939 Gene

No data available for Paralogs for ENSG00000212939 Gene

Variants for ENSG00000212939 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000212939 Gene

Disorders for ENSG00000212939 Gene

No disorders were found for ENSG00000212939 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000212939 Gene

Publications for ENSG00000212939 Gene

No publications were found for ENSG00000212939 Gene.

No data available for Mastermind for ENSG00000212939 Gene

Products for ENSG00000212939 Gene

Sources for ENSG00000212939 Gene