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ENSG00000212558 Gene(RNA Gene)

 

GCID:
GC02M010147
GIFtS:
6
Genes Participants
UDN Logo

Aliases for ENSG00000212558 Gene

Subcategory (RNA class) for ENSG00000212558 Gene

snoRNA

Quality Score for this RNA gene is

13

Aliases for ENSG00000212558 Gene

  • RF00568 5

External Ids for ENSG00000212558 Gene

ORGUL Members for ENSG00000212558 Gene

Previous GeneCards Identifiers for ENSG00000212558 Gene

  • GC02M010230

Summaries for ENSG00000212558 Gene

GeneCards Summary for ENSG00000212558 Gene

ENSG00000212558 is an RNA Gene, and is affiliated with the snoRNA class.

Additional gene information for ENSG00000212558 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ENSG00000212558 Gene

Genomics for ENSG00000212558 Gene

Products:

  1. Regulatory Element

GeneHancer (GH) Regulatory Elements for ENSG00000212558 Gene

Promoters and enhancers for ENSG00000212558 Gene
GeneHancer (GH) Identifier GH Type GH
Score		 GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites		 Gene Targets
GH02J010089 Enhancer 1 FANTOM5 Ensembl ENCODE 650.7 -0.3 -310 2.3 SMARCA5 ZNF687 TRIM22 ELF1 DPF2 ZBTB40 IKZF1 NBN MLLT1 ZBTB33 GC02M010090 ENSG00000212558 CYS1 LOC101929882 RRM2
GH02J010097 Enhancer 1 Ensembl ENCODE 0.4 -7.3 -7329 0.3 FOXA2 RB1 SIN3A ZNF2 ZNF48 RAD21 SCRT2 ZNF143 ATF7 IKZF2 ENSG00000212558 GC02M010090 RRM2
GH02J010103 Enhancer 0.6 ENCODE 0.4 -13.1 -13110 0.2 NFIB BHLHE40 ELF1 ZIC2 ZNF592 MITF NFIC IKZF1 ZFX EMSY ENSG00000212558 GC02M010090 RRM2
GH02J010118 Enhancer 0.8 FANTOM5 ENCODE 0.3 -28.0 -28001 0.2 ELF3 MEIS2 PKNOX1 POLR2A GABPB1 RUNX3 ENSG00000233502 CYS1 C2orf48 HPCAL1 RRM2 ENSG00000212558 GC02M010090
GH02J010116 Enhancer 0.6 Ensembl 0.3 -26.0 -25982 0.2 SAP130 HLF JUNB CEBPB BATF EP300 ATF2 NFIL3 CEBPA IKZF1 ENSG00000233502 CYS1 C2orf48 HPCAL1 RRM2 ENSG00000212558 GC02M010090
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around ENSG00000212558 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000212558 Gene

Genomic Locations for ENSG00000212558 Gene
chr2:10,090,205-10,090,319
(GRCh38/hg38)
Size:
115 bases
Orientation:
Minus strand
chr2:10,230,332-10,230,446
(GRCh37/hg19)

Genomic View for ENSG00000212558 Gene

Genes around ENSG00000212558 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000212558 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000212558 Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

No data available for RefSeq DNA sequence for ENSG00000212558 Gene

Proteins for ENSG00000212558 Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

Post-translational modifications for ENSG00000212558 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000212558 Gene

Domains & Families for ENSG00000212558 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ENSG00000212558 Gene

Function for ENSG00000212558 Gene

Products:

  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000212558 Gene

Localization for ENSG00000212558 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000212558 Gene

Pathways & Interactions for ENSG00000212558 Gene

SuperPathways for ENSG00000212558 Gene

PathCards logo More details on SuperPathways for ENSG00000212558
No Data Available

Interacting Proteins for ENSG00000212558 Gene

Gene Ontology (GO) - Biological Process for ENSG00000212558 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ENSG00000212558 Gene

Drugs & Compounds for ENSG00000212558 Gene

Products:

  1. Drug
No Compound Related Data Available

Transcripts for ENSG00000212558 Gene

Products:

  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone

mRNA/cDNA for ENSG00000212558 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000212558 Gene

No ASD Table

Relevant External Links for ENSG00000212558 Gene

GeneLoc Exon Structure for
ENSG00000212558

Expression for ENSG00000212558 Gene

Products:

  1. Primer

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ENSG00000212558 Gene

mRNA expression in normal human tissues for ENSG00000212558 Gene
mRNA expression by GTEx for ENSG00000212558 Gene
genes like me logo Genes that share expression patterns with ENSG00000212558: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000212558 Gene

Orthologs for ENSG00000212558 Gene

This gene was present in the common ancestor of chordates.

Orthologs for ENSG00000212558 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
 Mammalia SNORA26 34
  • 99 (a)
 OneToOne
mouse
(Mus musculus)
 Mammalia Gm22786 34
  • 81 (a)
 ManyToMany
dog
(Canis familiaris)
 Mammalia SNORA26 34
  • 72 (a)
 ManyToMany
oppossum
(Monodelphis domestica)
 Mammalia SNORA26 34
  • 70 (a)
 OneToMany
platypus
(Ornithorhynchus anatinus)
 Mammalia SNORA26 34
  • 61 (a)
 OneToMany
chicken
(Gallus gallus)
 Aves SNORA26 34
  • 61 (a)
 OneToMany
lizard
(Anolis carolinensis)
 Reptilia SNORA26 34
  • 63 (a)
 OneToMany
zebrafish
(Danio rerio)
 Actinopterygii SNORA26 34
  • 54 (a)
 OneToMany
Species where no ortholog for ENSG00000212558 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for ENSG00000212558 Gene

ENSEMBL:
Gene Tree for ENSG00000212558 (if available)
TreeFam:
Gene Tree for ENSG00000212558 (if available)

Paralogs for ENSG00000212558 Gene

No data available for Paralogs for ENSG00000212558 Gene

Variants for ENSG00000212558 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000212558 Gene

Disorders for ENSG00000212558 Gene

No disorders were found for ENSG00000212558 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000212558 Gene

Publications for ENSG00000212558 Gene

No publications were found for ENSG00000212558 Gene.

Products for ENSG00000212558 Gene

Sources for ENSG00000212558 Gene

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