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Aliases for ENSG00000212338 Gene

Subcategory (RNA class) for ENSG00000212338 Gene

snoRNA

Quality Score for this RNA gene is

15

Aliases for ENSG00000212338 Gene

  • RF00272 5

External Ids for ENSG00000212338 Gene

ORGUL Members for ENSG00000212338 Gene

Previous GeneCards Identifiers for ENSG00000212338 Gene

  • GC01P177432
  • GC01P179165

Summaries for ENSG00000212338 Gene

GeneCards Summary for ENSG00000212338 Gene

ENSG00000212338 is an RNA Gene, and is affiliated with the snoRNA class.

fRNAdb sequence ontologies for ENSG00000212338 Gene - the ORGUL cluster for this gene includes several descriptions:

  • H_ACA_box_snoRNA: Members of the box H/ACA family contain an ACA triplet, exactly 3 nt upstream from the 3' end and an H-box in a hinge region that links two structurally similar functional domains of the molecule. Both boxes are important for snoRNA biosynthesis and function. A few box H/ACA snoRNAs are involved in rRNA processing; most others are known or predicted to participate in selection of uridine nucleosides in rRNA to be converted to pseudouridines. Site selection is mediated by direct base pairing of the snoRNA with rRNA through one or both targeting domains.

  • Small nucleolar RNA SNORA67: U67 belongs to the H/ACA class of snoRNAs which are thought to guide the sites of modification of uridines to pseudouridines.

  • Small nucleolar RNA SNORA67: U67 belongs to the H/ACA class of snoRNAs which are thought to guide the sites of modification of uridines to pseudouridines.

View fRNAdb secondary structures for ENSG00000212338

Additional gene information for ENSG00000212338 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for ENSG00000212338 Gene

Genomics for ENSG00000212338 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000212338 Gene

Promoters and enhancers for ENSG00000212338 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J179126 Enhancer 1.3 Ensembl ENCODE dbSUPER 11.7 -67.9 -67899 4.8 HDGF PKNOX1 YY1 GTF3C2 ZNF207 FOS ATF7 RXRA REST MAFF TOR3A ENSG00000212338 EIF4A1P11 ENSG00000201619 AXDND1 ENSG00000234041 GC01M179101 PIR61676 ABL2
GH01J179169 Enhancer 1.1 Ensembl ENCODE dbSUPER 12.7 -26.5 -26495 1.6 JUN CEBPG ZNF121 ZNF335 ZFHX2 FOSL2 FOS EGR2 ZNF202 ZNF362 TOR3A ENSG00000212338 ENSG00000201619 EIF4A1P11 CEP350 SETP10 ENSG00000234041 ABL2
GH01J179174 Enhancer 0.9 Ensembl ENCODE dbSUPER 12.7 -20.3 -20344 2.9 SP1 JUND RXRA CEBPB NFE2 HNF4A RAD21 AXDND1 TOR3A ENSG00000212338 ENSG00000201619 EIF4A1P11 FAM20B SETP10 ENSG00000234041 ABL2
GH01J179163 Enhancer 0.8 ENCODE dbSUPER 11.9 -31.7 -31737 3.3 JUN MNT RFX5 ZNF7 SP1 ZNF217 GATA3 CTBP1 SCRT2 TOR3A ENSG00000212338 EIF4A1P11 ENSG00000201619 ENSG00000261060 FAM20B AXDND1 SETP10 ENSG00000234041 ABL2
GH01J179166 Enhancer 0.7 dbSUPER 11.9 -29.2 -29194 1 ZNF146 PKNOX1 INSM2 FEZF1 BCL11B ZNF213 ZSCAN5C KLF8 OVOL3 ZEB2 TOR3A ENSG00000212338 EIF4A1P11 ENSG00000201619 SETP10 ENSG00000234041 ABL2
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around ENSG00000212338 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000212338 Gene

Genomic Locations for ENSG00000212338 Gene
chr1:179,196,473-179,196,579
(GRCh38/hg38)
Size:
107 bases
Orientation:
Plus strand
chr1:179,165,608-179,165,714
(GRCh37/hg19)

Genomic View for ENSG00000212338 Gene

Genes around ENSG00000212338 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000212338 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000212338 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for ENSG00000212338 Gene

ORGUL Member Location for ENSG00000212338 gene

No data available for RefSeq DNA sequence for ENSG00000212338 Gene

Proteins for ENSG00000212338 Gene

Post-translational modifications for ENSG00000212338 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000212338 Gene

Domains & Families for ENSG00000212338 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ENSG00000212338 Gene

Function for ENSG00000212338 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000212338 Gene

Localization for ENSG00000212338 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000212338 Gene

Pathways & Interactions for ENSG00000212338 Gene

SuperPathways for ENSG00000212338 Gene

No Data Available

Interacting Proteins for ENSG00000212338 Gene

Gene Ontology (GO) - Biological Process for ENSG00000212338 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ENSG00000212338 Gene

Drugs & Compounds for ENSG00000212338 Gene

No Compound Related Data Available

Transcripts for ENSG00000212338 Gene

fRNAdb Secondary structures for ENSG00000212338 Gene

  • RF00272;SNORA67;AEKP01073759.1/2382-2276

mRNA/cDNA for ENSG00000212338 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000212338 Gene

No ASD Table

Relevant External Links for ENSG00000212338 Gene

GeneLoc Exon Structure for
ENSG00000212338

Expression for ENSG00000212338 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ENSG00000212338 Gene

genes like me logo Genes that share expression patterns with ENSG00000212338: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000212338 Gene

Orthologs for ENSG00000212338 Gene

This gene was present in the common ancestor of mammals.

Orthologs for ENSG00000212338 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia SNORA67 34
  • 98 (a)
OneToOne
cow
(Bos Taurus)
Mammalia SNORA67 34
  • 53 (a)
ManyToMany
mouse
(Mus musculus)
Mammalia Gm24029 34
  • 49 (a)
ManyToMany
platypus
(Ornithorhynchus anatinus)
Mammalia SNORA67 34
  • 48 (a)
OneToMany
dog
(Canis familiaris)
Mammalia SNORA67 34
  • 45 (a)
OneToMany
Species where no ortholog for ENSG00000212338 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for ENSG00000212338 Gene

ENSEMBL:
Gene Tree for ENSG00000212338 (if available)
TreeFam:
Gene Tree for ENSG00000212338 (if available)

Paralogs for ENSG00000212338 Gene

No data available for Paralogs for ENSG00000212338 Gene

Variants for ENSG00000212338 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000212338 Gene

Disorders for ENSG00000212338 Gene

No disorders were found for ENSG00000212338 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000212338 Gene

Publications for ENSG00000212338 Gene

  1. Small nucleolar RNAs: an abundant group of noncoding RNAs with diverse cellular functions. (PMID: 12007400) Kiss T (Cell 2002) 1

Products for ENSG00000212338 Gene

Sources for ENSG00000212338 Gene

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