Aliases for ENSG00000212224 Gene

Subcategory (RNA class) for ENSG00000212224 Gene

snoRNA

Number of RNA Genes sources:

3 / 17

Aliases for ENSG00000212224 Gene

  • AL133229.1 5
  • SNORA26L9 170
  • SNODB743 177
  • RF00568 168

External Ids for ENSG00000212224 Gene

Previous GeneCards Identifiers for ENSG00000212224 Gene

  • GC20M039774
  • GC20M040341

Summaries for ENSG00000212224 Gene

GeneCards Summary for ENSG00000212224 Gene

ENSG00000212224 is an RNA Gene, and is affiliated with the snoRNA class.

Rfam classification for ENSG00000212224 Gene

  • Small nucleolar RNA SNORA26

Additional gene information for ENSG00000212224 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for ENSG00000212224 Gene

Genomics for ENSG00000212224 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for ENSG00000212224 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH20J041713 Enhancer 0.4 Ensembl 600.7 -1.4 -1401 0.8 NFIC NR2F1 ESRRA ENSG00000212224 MG828614 CHD6
GH20J041668 Enhancer 0.9 Ensembl 10.5 +42.6 42600 1.2 ZNF512 LEF1 IKZF1 JUND MTA2 PKNOX1 MTA1 BRD9 ZNF24 DPF2 TOP1 ENSG00000212224 RF00026-642 RNU6-1018P HSALNG0130179 CHD6
GH20J041690 Enhancer 0.5 Ensembl 11.8 +21.8 21799 0.4 DPF2 NFE2 ZEB2 CBFA2T3 ARID1B EMSY SMARCA4 ENSG00000212224 RNU6-1018P RF00019-075 RF00026-642 CHD6
GH20J041717 Enhancer 0.8 Ensembl ENCODE 0.4 -5.2 -5200 0.4 ZNF341 NFIC BCL6 NFE2 KDM1A FOS CUX1 CBFA2T2 GATA2 CBFA2T3 ENSG00000212224 MG828614 CHD6
GH20J041738 Enhancer 0.8 Ensembl ENCODE 0.3 -26.5 -26471 0.7 CTCF JUND REST RAD21 ZNF24 SMARCA5 ZNF444 SMC3 ZNF217 ZNF207 ENSG00000212224 MG828614 CHD6
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000212224 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for ENSG00000212224 Gene

Genomic Locations for ENSG00000212224 Gene
chr20:41,712,479-41,712,600
(GRCh38/hg38)
Size:
122 bases
Orientation:
Minus strand
chr20:40,341,118-40,341,239
(GRCh37/hg19)
Size:
122 bases
Orientation:
Minus strand

Genomic View for ENSG00000212224 Gene

Genes around ENSG00000212224 on UCSC Golden Path with GeneCards custom track
ENSG00000212224 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
ENSG00000212224 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000212224 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000212224 Gene

Proteins for ENSG00000212224 Gene

Post-translational modifications for ENSG00000212224 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000212224 Gene

Domains & Families for ENSG00000212224 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000212224 Gene

Function for ENSG00000212224 Gene

Phenotypes From GWAS Catalog for ENSG00000212224 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000212224 Gene

Localization for ENSG00000212224 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000212224 Gene

Pathways & Interactions for ENSG00000212224 Gene

PathCards logo

SuperPathways for ENSG00000212224 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ENSG00000212224 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000212224 Gene

Drugs & Compounds for ENSG00000212224 Gene

No Compound Related Data Available

Transcripts for ENSG00000212224 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for ENSG00000212224 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS00006A398A_9606 snoRNA 122 4

Ensembl: ENST00000390922 (view in UCSC) ,

Rfam: RF00568,

snoDB: SNODB743,

snOPY: Homo_sapiens300228,

ENSG00000212224 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000212224 Gene

No ASD Table

Relevant External Links for ENSG00000212224 Gene

GeneLoc Exon Structure for
ENSG00000212224

No data available for mRNA/cDNA for ENSG00000212224 Gene

Expression for ENSG00000212224 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ENSG00000212224 Gene

genes like me logo Genes that share expression patterns with ENSG00000212224: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000212224 Gene

Orthologs for ENSG00000212224 Gene

This gene was present in the common ancestor of chordates.

Orthologs for ENSG00000212224 Gene

Organism Taxonomy Gene Similarity Type Details
Chimpanzee
(Pan troglodytes)
Mammalia SNORA26 31
  • 98 (a)
OneToOne
Mouse
(Mus musculus)
Mammalia Snora26 31
  • 81 (a)
ManyToMany
Oppossum
(Monodelphis domestica)
Mammalia SNORA26 31
  • 74 (a)
OneToMany
Dog
(Canis familiaris)
Mammalia SNORA26 31
  • 71 (a)
ManyToMany
Platypus
(Ornithorhynchus anatinus)
Mammalia SNORA26 31
  • 63 (a)
OneToMany
Chicken
(Gallus gallus)
Aves SNORA26 31
  • 64 (a)
OneToMany
Lizard
(Anolis carolinensis)
Reptilia SNORA26 31
  • 64 (a)
OneToMany
Zebrafish
(Danio rerio)
Actinopterygii SNORA26 31
  • 53 (a)
OneToMany
Species where no ortholog for ENSG00000212224 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Eremothecium gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • Alpha proteobacteria (Wolbachia pipientis)
  • Amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • Baker's yeast (Saccharomyces cerevisiae)
  • Barley (Hordeum vulgare)
  • Beta proteobacteria (Neisseria meningitidis)
  • Bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • Common water flea (Daphnia pulex)
  • Corn (Zea mays)
  • Cow (Bos Taurus)
  • E. coli (Escherichia coli)
  • Filamentous fungi (Aspergillus nidulans)
  • Firmicute Bacteria (Streptococcus pneumoniae)
  • Fission Yeast (Schizosaccharomyces pombe)
  • Fruit Fly (Drosophila melanogaster)
  • Green Algae (Chlamydomonas reinhardtii)
  • Honey Bee (Apis mellifera)
  • K. Lactis Yeast (Kluyveromyces lactis)
  • Loblloly Pine (Pinus taeda)
  • Malaria Parasite (Plasmodium falciparum)
  • Medicago Trunc (Medicago Truncatula)
  • Moss (Physcomitrella patens)
  • Orangutan (Pongo pygmaeus)
  • Pig (Sus scrofa)
  • Rainbow Trout (Oncorhynchus mykiss)
  • Rat (Rattus norvegicus)
  • Rice (Oryza sativa)
  • Rice Blast Fungus (Magnaporthe grisea)
  • Schistosome Parasite (Schistosoma mansoni)
  • Sea Anemone (Nematostella vectensis)
  • Sea Vase (Ciona intestinalis)
  • Sea Squirt (Ciona savignyi)
  • Sea Urchin (Strongylocentrotus purpuratus)
  • Sorghum (Sorghum bicolor)
  • Soybean (Glycine max)
  • Stem Rust Fungus (Puccinia graminis)
  • Sugarcane (Saccharum officinarum)
  • Thale Cress (Arabidopsis thaliana)
  • Tomato (Lycopersicon esculentum)
  • Toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • Tropical Clawed Frog (Silurana tropicalis)
  • Wheat (Triticum aestivum)
  • Worm (Caenorhabditis elegans)

Evolution for ENSG00000212224 Gene

ENSEMBL:
Gene Tree for ENSG00000212224 (if available)
TreeFam:
Gene Tree for ENSG00000212224 (if available)

Paralogs for ENSG00000212224 Gene

No data available for Paralogs for ENSG00000212224 Gene

Variants for ENSG00000212224 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000212224 Gene

Disorders for ENSG00000212224 Gene

No disorders were found for ENSG00000212224 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000212224 Gene

Publications for ENSG00000212224 Gene

No publications were found for ENSG00000212224 Gene.

No data available for Mastermind for ENSG00000212224 Gene

Products for ENSG00000212224 Gene

Sources for ENSG00000212224 Gene