Aliases for ENSG00000207480 Gene
Subcategory (RNA class) for ENSG00000207480 Gene
Y RNA
Quality Score for this RNA gene is
13
Aliases for ENSG00000207480 Gene
- RF00019 5
External Ids for ENSG00000207480 Gene
- Ensembl: ENSG00000207480
Previous GeneCards Identifiers for ENSG00000207480 Gene
- GC04M089470
- GC04M089251
Summaries for ENSG00000207480 Gene
GeneCards Summary for ENSG00000207480 Gene
ENSG00000207480 is an RNA Gene, and is affiliated with the Y RNA class.
Additional gene information for ENSG00000207480 Gene
No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ENSG00000207480 Gene
Genomics for ENSG00000207480 Gene
GeneHancer (GH) Regulatory Elements for ENSG00000207480 Gene
Promoters and enhancers for ENSG00000207480 Gene
| GeneHancer (GH) Identifier | GH Type | GH Score |
GH Sources | Gene Association Score | Total Score | TSS distance (kb) | Number of Genes Away | Size (kb) | Transcription Factor Binding Sites |
Gene Targets |
|---|---|---|---|---|---|---|---|---|---|---|
| GH04J088318 | Enhancer | 1 | Ensembl ENCODE | 0.4 | +10.0 | 9996 | 3.1 | PKNOX1 CLOCK NFIB NEUROD1 STAT5A IRF4 SCRT2 ZNF207 ZNF143 ATF7 | PPM1K LOC105369192 RNU6-112P ENSG00000207480 GC04M088332 | |
| GH04J088340 | Enhancer | 0.8 | Ensembl ENCODE | 0.4 | -11.2 | -11177 | 2.1 | ZNF362 FOXA2 JUN FOXA1 PRDM6 IKZF1 SCRT2 FOS FOSL2 TRIM28 | LOC105369192 HERC6 PPM1K GC04M088332 ENSG00000207480 LOC105377326 GC04M088341 | |
| GH04J088291 | Enhancer | 0.8 | FANTOM5 ENCODE dbSUPER | 0.3 | +39.1 | 39125 | 0.3 | SP1 RFX1 RFX5 | PPM1K MEPE NAP1L5 LOC105369192 GC04M088332 ENSG00000207480 | |
| GH04J088348 | Promoter | 0.5 | EPDnew | 0.4 | -18.6 | -18627 | 0.1 | PPM1K LOC105369192 LOC105377326 ENSG00000207480 GC04M088332 GC04M088341 | ||
| GH04J088297 | Enhancer | 0.6 | dbSUPER | 0.3 | +32.3 | 32338 | 1.6 | MTA2 SOX6 TEAD4 TAL1 CBFA2T3 TCF12 NFIC NCOR1 HDAC2 CBFA2T2 | LOC105369192 PPM1K ENSG00000207480 GC04M088332 |
- Elite GeneHancer and/or Elite GeneHancer-gene association
Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)
GeneHancers around ENSG00000207480 on UCSC Golden Path with GeneCards custom track
Regulatory Element Products
Genomic Locations for ENSG00000207480 Gene
Genomic Locations for ENSG00000207480 Gene
- chr4:88,330,176-88,330,278
- (GRCh38/hg38)
- Size:
- 103 bases
- Orientation:
- Minus strand
- chr4:89,251,328-89,251,430
- (GRCh37/hg19)
- Size:
- 103 bases
- Orientation:
- Minus strand
Genomic View for ENSG00000207480 Gene
Genes around ENSG00000207480 on UCSC Golden Path with GeneCards custom track
- Cytogenetic band:
-
- 4q22.1 by Ensembl
ENSG00000207480 Gene in genomic location: bands according to
Ensembl, locations according to GeneLoc
(and/or Entrez Gene and/or Ensembl if different)
Genomic Neighborhood
• Exon Structure
• Gene Density
No data available for RefSeq DNA sequence for ENSG00000207480 Gene
Proteins for ENSG00000207480 Gene
Post-translational modifications for ENSG00000207480 Gene
No Post-translational modifications
Antibody Products
- Search GeneTex for Antibodies for ENSG00000207480
Protein Products
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for ENSG00000207480
- Origene Custom Protein Services for ENSG00000207480
- Search GeneTex for Proteins for ENSG00000207480
No data available for DME Specific Peptides for ENSG00000207480 Gene
Domains & Families for ENSG00000207480 Gene
Graphical View of Domain Structure for InterPro Entry
No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ENSG00000207480 Gene
Function for ENSG00000207480 Gene
Animal Model Products
- Taconic Biosciences: Generate A Custom CRISPR Mouse Model For Your Study
- Cyagen custom Knockout/knockin (KOKI) mouse models for ENSG00000207480
-
miRNA Products
Inhibitory RNA Products
No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000207480 Gene
Localization for ENSG00000207480 Gene
No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000207480 Gene
Transcripts for ENSG00000207480 Gene
mRNA/cDNA for ENSG00000207480 Gene
- (1) Ensembl transcripts including schematic representations, and UCSC links where relevant :
-
- ENST00000384749 103 bps (uc062ycv.1)
CRISPR Products
- Browse CRISPR knockouts for ENSG00000207480
miRNA Products
Inhibitory RNA Products
Relevant External Links for ENSG00000207480 Gene
- GeneLoc Exon Structure for
- ENSG00000207480
Expression for ENSG00000207480 Gene
mRNA differential expression in normal tissues according to GTEx for ENSG00000207480 Gene
This gene is overexpressed in Heart - Left Ventricle (x4.4), Brain - Caudate (basal ganglia) (x4.2), and Brain - Amygdala (x4.1).
Primer Products
No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000207480 Gene
Orthologs for ENSG00000207480 Gene
This gene was present in the common ancestor of chordates.
| Organism | Taxonomy | Gene | Similarity | Type | Details |
|---|---|---|---|---|---|
| chimpanzee (Pan troglodytes) |
Mammalia | Y_RNA 34 |
|
OneToOne | |
| platypus (Ornithorhynchus anatinus) |
Mammalia | Y_RNA 34 |
|
ManyToMany | |
| chicken (Gallus gallus) |
Aves | Y_RNA 34 |
|
OneToMany | |
| lizard (Anolis carolinensis) |
Reptilia | Y_RNA 34 |
|
OneToMany |
- Species where no ortholog for ENSG00000207480 was found in the sources mined by GeneCards:
-
- A. gosspyii yeast (Ashbya gossypii)
- Actinobacteria (Mycobacterium tuberculosis)
- African clawed frog (Xenopus laevis)
- African malaria mosquito (Anopheles gambiae)
- Alicante grape (Vitis vinifera)
- alpha proteobacteria (Wolbachia pipientis)
- amoeba (Dictyostelium discoideum)
- Archea (Pyrococcus horikoshii)
- baker's yeast (Saccharomyces cerevisiae)
- barley (Hordeum vulgare)
- beta proteobacteria (Neisseria meningitidis)
- bread mold (Neurospora crassa)
- Chromalveolata (Phytophthora infestans)
- common water flea (Daphnia pulex)
- corn (Zea mays)
- cow (Bos Taurus)
- dog (Canis familiaris)
- E. coli (Escherichia coli)
- filamentous fungi (Aspergillus nidulans)
- Firmicute bacteria (Streptococcus pneumoniae)
- fission yeast (Schizosaccharomyces pombe)
- fruit fly (Drosophila melanogaster)
- green algae (Chlamydomonas reinhardtii)
- honey bee (Apis mellifera)
- K. lactis yeast (Kluyveromyces lactis)
- loblloly pine (Pinus taeda)
- malaria parasite (Plasmodium falciparum)
- medicago trunc (Medicago Truncatula)
- moss (Physcomitrella patens)
- mouse (Mus musculus)
- oppossum (Monodelphis domestica)
- orangutan (Pongo pygmaeus)
- pig (Sus scrofa)
- rainbow trout (Oncorhynchus mykiss)
- rat (Rattus norvegicus)
- rice (Oryza sativa)
- rice blast fungus (Magnaporthe grisea)
- schistosome parasite (Schistosoma mansoni)
- sea anemone (Nematostella vectensis)
- sea squirt (Ciona intestinalis)
- sea squirt (Ciona savignyi)
- sea urchin (Strongylocentrotus purpuratus)
- sorghum (Sorghum bicolor)
- soybean (Glycine max)
- stem rust fungus (Puccinia graminis)
- sugarcane (Saccharum officinarum)
- thale cress (Arabidopsis thaliana)
- tomato (Lycopersicon esculentum)
- toxoplasmosis (Toxoplasma gondii)
- Trichoplax (Trichoplax adhaerens)
- tropical clawed frog (Silurana tropicalis)
- wheat (Triticum aestivum)
- worm (Caenorhabditis elegans)
- zebrafish (Danio rerio)
Paralogs for ENSG00000207480 Gene
No data available for Paralogs for ENSG00000207480 Gene
Variants for ENSG00000207480 Gene
No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000207480 Gene
Disorders for ENSG00000207480 Gene
No disorders were found for ENSG00000207480 Gene.
No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000207480 Gene
Publications for ENSG00000207480 Gene
No publications were found for ENSG00000207480 Gene.
Products for ENSG00000207480 Gene
- Browse R&D Systems for Antibodies
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- Browse Human Proteins and Enzymes
- Browse Primary Antibodies
- Browse Proteins and Enzymes
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- Browse Activity Assays
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- Custom Assay Services
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- Plasmid Preparation
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- Browse Sino Biological cDNA Clones
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- High-throughput Antibody Production Service
- Protein Production Service
- Epitope Tag Antibodies & Reporter Protein Antibodies
- Lentiviral ORF Clones
- Search GeneTex for Antibodies for ENSG00000207480
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- Browse GeneCopoeia Cell Lines
- Search GeneCopoeia for knockout CRISPR/Cas9 clones, lentivirus, and/or AAV products for ENSG00000207480
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Sources for ENSG00000207480 Gene
- (1) GeneCards
- (2) HGNC
- (3) EntrezGene
- (4) Swiss-Prot
- (5) Ensembl
- (6) OMIM
- (7) GeneLoc
- (8) Gene Wiki
- (9) UCSC
- (10) PhosphoSitePlus
- (11) GO
- (12) TrEMBL
- (13) InterPro
- (14) ProtoNet
- (15) Blocks
- (16) MGI
- (17) IUBMB
- (18) KEGG
- (19) MINT
- (20) STRING
- (21) IntAct
- (22) Novoseek
- (23) PharmGKB
- (24) DrugBank
- (25) HMDB
- (26) UniGene
- (27) AceView
- (28) ASD
- (29) ECgene
- (30) GeneAnnot
- (31) CGAP SAGE
- (32) SOURCE
- (33) HomoloGene
- (34) PanEnsembl
- (35) euGenes
- (36) SGD
- (37) FlyBase
- (38) WormBase
- (39) Pseudogene
- (40) DGV
- (41) dbSNP
- (42) GenAtlas
- (43) HGMD
- (44) GAD
- (45) BGMUT
- (46) HuGE
- (47) Atlas
- (48) Cell Signaling Technology
- (49) GenBank
- (50) H-invDB
- (51) HORDE
- (52) HUGE
- (53) IMGT
- (54) Leiden
- (55) miRBase
- (56) DME
- (57) OriGene
- (58) PubMed
- (59) R&D Systems
- (60) TGDB
- (61) Tocris
- (62) Abcam
- (63) Novus Biologicals
- (64) ProSpec
- (65) Sino Biological
- (66) GenScript
- (67) Qiagen
- (68) Cloud-Clone Corp.
- (69) OCA
- (70) Proteopedia
- (71) MOPED
- (72) neXtProt
- (73) Reactome
- (74) GeneGo (Thomson Reuters)
- (75) fRNAdb
- (76) DISEASES
- (77) SIMAP
- (78) GenomeRNAi
- (79) LifeMap
- (80) miRTarBase
- (81) MalaCards
- (82) Invitrogen
- (83) BitterDB
- (84) Vector BioLabs
- (85) ESI-BIO
- (86) RefSeq
- (87) BioSystems
- (88) MaxQB
- (89) IUPHAR
- (90) BioGPS
- (91) Illumina
- (92) COMPARTMENTS
- (93) HOMER
- (94) PaxDb
- (95) ApexBio
- (96) Addgene
- (97) antibodies-online
- (98) CYP
- (99) NONCODE
- (100) SwitchGear Genomics
- (101) TreeFam
- (102) PathCards
- (103) GeneReviews
- (104) GeneTex
- (105) Taconic Biosciences
- (106) GTEx
- (107) ProteomicsDB
- (108) SCBT
- (109) DGIdb
- (110) ClinicalTrials
- (111) FDA Approved Drugs
- (112) RVIS
- (113) SIGNOR
- (114) diseasecard
- (115) NIH Rare Diseases
- (116) Orphanet
- (117) UMLS
- (118) GTR
- (119) Disease Ontology
- (120) Genetics Home Reference
- (121) MeSH
- (122) MedlinePlus
- (123) CDC
- (124) NINDS
- (125) NCBI Bookshelf
- (126) ClinVar
- (127) Gene Damage Index
- (128) ViGene Biosciences
- (129) HPO
- (130) UDN
- (131) VISTA
- (132) FANTOM5
- (133) ENCODE
- (134) ProSci
- (135) Horizon
- (136) NURSA
- (137) IID
- (138) Cyagen
- (139) VectorBuilder
- (140) SNPedia
- (141) BRCA Exchange
- (142) St John's Lab
- (143) CIViC
- (144) ProteoGenix
- (145) dbSUPER
- (146) TISSUES
- (147) Gene ORGANizer
- (148) abm
- (149) CrownBio
- (150) Human Protein Atlas
- (151) GWAS Catalog
- (152) Monarch Initiative
- (153) DataMed
- (154) HumanCyc
- (155) genomics-online
- (156) UCNEbase
- (157) EPDnew
- (158) Applied Biosystems
- (159) GlyConnect
- (160) Aminode
- (161) GeneCopoeia
- (162) GPS-Prot
- (163) RNACentral
- (164) LncRNADisease
- (165) LOVD
- (166) miR2Disease
- (167) DiseaseEnhancer
- (168) Boster Bio
- (169) Biorbyt