ENSG00000207407 Gene (RNA Gene)

 

GC11M019591
GIFtS:
6

Aliases for ENSG00000207407 Gene

Subcategory (RNA class) for ENSG00000207407 Gene

snoRNA

Quality Score for this RNA gene is

13

Aliases for ENSG00000207407 Gene

External Ids for ENSG00000207407 Gene

Previous GeneCards Identifiers for ENSG00000207407 Gene

  • GC11M019572

Summaries for ENSG00000207407 Gene

GeneCards Summary for ENSG00000207407 Gene

ENSG00000207407 is an RNA Gene, and is affiliated with the snoRNA class.

Rfam classification for ENSG00000207407 Gene

  • Small nucleolar RNA SNORA1

Additional gene information for ENSG00000207407 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for ENSG00000207407 Gene

Genomics for ENSG00000207407 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000207407 Gene

Promoters and enhancers for ENSG00000207407 Gene
GeneHancer (GH) Identifier GH Type GH
Score		 GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites		 Gene Targets
GH11J019589 Enhancer 0.3 Ensembl dbSUPER 750.6 +1.4 1390 0.2 ENSG00000207407 piR-59769-080 NAV2
GH11J019711 Promoter/Enhancer 2.2 FANTOM5 Ensembl ENCODE CraniofacialAtlas dbSUPER 9.6 -122.9 -122856 6.1 SP1 ZBTB6 RBPJ POLR2A NFYC L3MBTL2 RAD21 ZNF121 MNT TEAD4 ENSG00000270607 LOC100126784 ENSG00000207407 NAV2
GH11J019776 Promoter/Enhancer 1.7 Ensembl ENCODE CraniofacialAtlas dbSUPER 10.2 -186.5 -186490 3.2 SP1 RELA RAD21 NKRF MLLT1 ZNF687 CREM IKZF1 RXRA PRDM10 ENSG00000207407 MIR4694 piR-56759-069 NAV2
GH11J019679 Enhancer 1.3 FANTOM5 Ensembl ENCODE dbSUPER 10.1 -89.6 -89603 3 POLR2A ZBTB33 SP1 MAFK RXRA PRDM10 SMARCC1 REST CHD2 JUN ENSG00000207407 lnc-E2F8-4 ENSG00000270607 NAV2
GH11J019673 Enhancer 1.1 Ensembl ENCODE CraniofacialAtlas dbSUPER 10.4 -84.4 -84409 6.6 ZBTB6 SP1 ZIC2 RXRA ZNF561 YY1 PRDM4 ZFHX2 ZNF335 JUN ENSG00000207407 lnc-E2F8-4 ENSG00000270607 NAV2
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000207407 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000207407 Gene

Genomic Locations for ENSG00000207407 Gene
chr11:19,591,156-19,591,291
(GRCh38/hg38)
Size:
136 bases
Orientation:
Minus strand
chr11:19,612,703-19,612,838
(GRCh37/hg19)
Size:
136 bases
Orientation:
Minus strand

Genomic View for ENSG00000207407 Gene

Genes around ENSG00000207407 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000207407 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000207407 Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

No data available for RefSeq DNA sequence for ENSG00000207407 Gene

Proteins for ENSG00000207407 Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

Post-translational modifications for ENSG00000207407 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000207407 Gene

Domains & Families for ENSG00000207407 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000207407 Gene

Function for ENSG00000207407 Gene

Products:

  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line

Phenotypes From GWAS Catalog for ENSG00000207407 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000207407 Gene

Localization for ENSG00000207407 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000207407 Gene

Pathways & Interactions for ENSG00000207407 Gene

PathCards logo

SuperPathways for ENSG00000207407 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ENSG00000207407 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ENSG00000207407 Gene

Drugs & Compounds for ENSG00000207407 Gene

Products:

  1. Drug
No Compound Related Data Available

Transcripts for ENSG00000207407 Gene

Products:

  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone

mRNA/cDNA for ENSG00000207407 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
(1) RNACentral transcripts :
(1) snOPY transcripts :
(1) Rfam transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000207407 Gene

No ASD Table

Relevant External Links for ENSG00000207407 Gene

GeneLoc Exon Structure for
ENSG00000207407

Expression for ENSG00000207407 Gene

Products:

  1. Primer

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ENSG00000207407 Gene

mRNA expression in normal human tissues for ENSG00000207407 Gene
mRNA expression by GTEx for ENSG00000207407 Gene
genes like me logo Genes that share expression patterns with ENSG00000207407: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000207407 Gene

Orthologs for ENSG00000207407 Gene

This gene was present in the common ancestor of chordates.

Orthologs for ENSG00000207407 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
 Mammalia SNORA1 33
  • 99 (a)
 OneToOne
dog
(Canis familiaris)
 Mammalia SNORA1 33
  • 69 (a)
 OneToOne
cow
(Bos Taurus)
 Mammalia SNORA1 33
  • 69 (a)
 OneToOne
platypus
(Ornithorhynchus anatinus)
 Mammalia SNORA1 33
  • 68 (a)
 OneToMany
oppossum
(Monodelphis domestica)
 Mammalia SNORA1 33
  • 64 (a)
 OneToMany
chicken
(Gallus gallus)
 Aves SNORA1 33
  • 60 (a)
 OneToMany
lizard
(Anolis carolinensis)
 Reptilia SNORA1 33
  • 61 (a)
 OneToMany
zebrafish
(Danio rerio)
 Actinopterygii SNORA1 33
  • 51 (a)
 OneToMany
Species where no ortholog for ENSG00000207407 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for ENSG00000207407 Gene

ENSEMBL:
Gene Tree for ENSG00000207407 (if available)
TreeFam:
Gene Tree for ENSG00000207407 (if available)

Paralogs for ENSG00000207407 Gene

No data available for Paralogs for ENSG00000207407 Gene

Variants for ENSG00000207407 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000207407 Gene

Disorders for ENSG00000207407 Gene

No disorders were found for ENSG00000207407 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000207407 Gene

Publications for ENSG00000207407 Gene

No publications were found for ENSG00000207407 Gene.

No data available for External Links for ENSG00000207407 Gene

Products for ENSG00000207407 Gene

Sources for ENSG00000207407 Gene