Aliases for ENSG00000203643 Gene

Subcategory (RNA class) for ENSG00000203643 Gene

lncRNA

Number of RNA Genes sources:

3 / 14

Aliases for ENSG00000203643 Gene

  • Novel Transcript 5
  • NONHSAG027018 92
  • HSALNG0013070 167
  • Lnc-NTSR2-1 168
  • AC012456.1 5

External Ids for ENSG00000203643 Gene

Previous GeneCards Identifiers for ENSG00000203643 Gene

  • GC03P139961
  • GC02M011861

Summaries for ENSG00000203643 Gene

GeneCards Summary for ENSG00000203643 Gene

ENSG00000203643 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000203643 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000203643 Gene

Genomics for ENSG00000203643 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000203643 Gene

Promoters and enhancers for ENSG00000203643 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH02J011722 Enhancer 0.7 Ensembl 500.7 +1.3 1321 0.6 TCF7 TEAD1 FOXA2 CEBPB ZBTB33 PBX2 JUND BCL6 CEBPG ZNF3 ENSG00000203643 LOC101929752 NONHSAG027019.2 LOC100506405 LPIN1
GH02J011724 Promoter 0.4 EPDnew 500.7 -0.1 -109 0.1 GLIS1 ENSG00000203643 LOC101929752 NONHSAG027019.2 LPIN1
GH02J011742 Promoter/Enhancer 2.7 EPDnew FANTOM5 Ensembl ENCODE CraniofacialAtlas dbSUPER 11.9 -22.7 -22716 9.4 EP300 ZNF217 CTCF ZSCAN5C SIN3A TCF12 NRF1 POLR2G SP1 NCOR1 LPIN1 ENSG00000230790 ENSG00000203643 E2F6 L13714-253 NONHSAG027019.2
GH02J011696 Enhancer 1.6 FANTOM5 Ensembl ENCODE CraniofacialAtlas dbSUPER 12.7 +26.4 26422 4.8 FOS TGIF2 TEAD1 ZBTB26 HINFP RBM25 ESRRA MYC RELA USF1 LPIN1 ENSG00000203643 ENSG00000230790 NTSR2 ENSG00000230044 E2F6 LOC100506405 LOC101929752
GH02J011752 Enhancer 1.4 FANTOM5 ENCODE dbSUPER 11.9 -29.7 -29696 2.3 SP1 JUND ZNF639 EP300 ZIC2 HES1 RELA MEF2C MYC RCOR1 L13714-253 LPIN1 ENSG00000203643 piR-53431-359 NONHSAG027019.2
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000203643 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000203643 Gene

Genomic Locations for ENSG00000203643 Gene
chr2:11,721,619-11,724,222
(GRCh38/hg38)
Size:
2,604 bases
Orientation:
Minus strand

Genomic View for ENSG00000203643 Gene

Genes around ENSG00000203643 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000203643 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000203643 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000203643 Gene

Proteins for ENSG00000203643 Gene

Post-translational modifications for ENSG00000203643 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000203643 Gene

Domains & Families for ENSG00000203643 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000203643 Gene

Function for ENSG00000203643 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000203643 Gene

Localization for ENSG00000203643 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000203643 Gene

Pathways & Interactions for ENSG00000203643 Gene

PathCards logo

SuperPathways for ENSG00000203643 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for ENSG00000203643 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000203643 Gene

Drugs & Compounds for ENSG00000203643 Gene

No Compound Related Data Available

Transcripts for ENSG00000203643 Gene

mRNA/cDNA for ENSG00000203643 Gene

3 RNACentral transcripts :
1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
3 NONCODE transcripts :
2 LncBook transcripts :
3 LNCipedia transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000203643 Gene

No ASD Table

Relevant External Links for ENSG00000203643 Gene

GeneLoc Exon Structure for
ENSG00000203643

Expression for ENSG00000203643 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000203643 Gene

Orthologs for ENSG00000203643 Gene

Evolution for ENSG00000203643 Gene

ENSEMBL:
Gene Tree for ENSG00000203643 (if available)
TreeFam:
Gene Tree for ENSG00000203643 (if available)

No data available for Orthologs for ENSG00000203643 Gene

Paralogs for ENSG00000203643 Gene

No data available for Paralogs for ENSG00000203643 Gene

Variants for ENSG00000203643 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000203643 Gene

Disorders for ENSG00000203643 Gene

No disorders were found for ENSG00000203643 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000203643 Gene

Publications for ENSG00000203643 Gene

No publications were found for ENSG00000203643 Gene.

No data available for Mastermind for ENSG00000203643 Gene

Products for ENSG00000203643 Gene

Sources for ENSG00000203643 Gene