Aliases for ENSG00000202440 Gene

Subcategory (RNA class) for ENSG00000202440 Gene


Number of RNA Genes sources:

3 / 17

Aliases for ENSG00000202440 Gene

  • AC124016.1 5
  • SNORD42BL1 170
  • SNODB1207 177
  • RF00150 168

External Ids for ENSG00000202440 Gene

Previous GeneCards Identifiers for ENSG00000202440 Gene

  • GC04M083681
  • GC04M083542
  • GC04M083323

Summaries for ENSG00000202440 Gene

GeneCards Summary for ENSG00000202440 Gene

ENSG00000202440 is an RNA Gene, and is affiliated with the snoRNA class.

Rfam classification for ENSG00000202440 Gene

  • Small nucleolar RNA SNORD42

Additional gene information for ENSG00000202440 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for ENSG00000202440 Gene

Genomics for ENSG00000202440 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for ENSG00000202440 Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH04J082410 Enhancer 0.6 Ensembl 0.4 -8.3 -8295 0.4 LEF1 RXRB MGA THRA ZNF384 KLF1 THRB ZBTB33 SMARCE1 TRIM24 ENSG00000273156 SCD5 ENOPH1 ENSG00000202440 piR-33730-063 HNRNPDL HNRNPD
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000202440 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for ENSG00000202440 Gene

Genomic Locations for ENSG00000202440 Gene
69 bases
Minus strand
69 bases
Minus strand

Genomic View for ENSG00000202440 Gene

Genes around ENSG00000202440 on UCSC Golden Path with GeneCards custom track
ENSG00000202440 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
ENSG00000202440 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000202440 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000202440 Gene

Proteins for ENSG00000202440 Gene

Post-translational modifications for ENSG00000202440 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000202440 Gene

Domains & Families for ENSG00000202440 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000202440 Gene

Function for ENSG00000202440 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000202440 Gene

Localization for ENSG00000202440 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000202440 Gene

Pathways & Interactions for ENSG00000202440 Gene

PathCards logo

SuperPathways for ENSG00000202440 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ENSG00000202440 Gene


No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000202440 Gene

Drugs & Compounds for ENSG00000202440 Gene

No Compound Related Data Available

Transcripts for ENSG00000202440 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for ENSG00000202440 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS0000717225_9606 snoRNA 69 4

Ensembl: ENST00000365570 (view in UCSC) ,

Rfam: RF00150,

snoDB: SNODB1207,

snOPY: Homo_sapiens300008,

ENSG00000202440 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000202440 Gene

No ASD Table

Relevant External Links for ENSG00000202440 Gene

GeneLoc Exon Structure for

No data available for mRNA/cDNA for ENSG00000202440 Gene

Expression for ENSG00000202440 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000202440 Gene

Orthologs for ENSG00000202440 Gene

This gene was present in the common ancestor of chordates.

Orthologs for ENSG00000202440 Gene

Organism Taxonomy Gene Similarity Type Details
(Pan troglodytes)
Mammalia SNORD42 31
  • 100 (a)
(Bos Taurus)
Mammalia SNORD42 31
  • 84 (a)
(Ornithorhynchus anatinus)
Mammalia SNORD42 31
  • 72 (a)
(Monodelphis domestica)
Mammalia SNORD42 31
  • 70 (a)
(Anolis carolinensis)
Reptilia SNORD42 31
  • 73 (a)
(Danio rerio)
Actinopterygii SNORD42 31
  • 71 (a)
Species where no ortholog for ENSG00000202440 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Eremothecium gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • Alpha proteobacteria (Wolbachia pipientis)
  • Amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • Baker's yeast (Saccharomyces cerevisiae)
  • Barley (Hordeum vulgare)
  • Beta proteobacteria (Neisseria meningitidis)
  • Bread mold (Neurospora crassa)
  • Chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • Common water flea (Daphnia pulex)
  • Corn (Zea mays)
  • Dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • Filamentous fungi (Aspergillus nidulans)
  • Firmicute Bacteria (Streptococcus pneumoniae)
  • Fission Yeast (Schizosaccharomyces pombe)
  • Fruit Fly (Drosophila melanogaster)
  • Green Algae (Chlamydomonas reinhardtii)
  • Honey Bee (Apis mellifera)
  • K. Lactis Yeast (Kluyveromyces lactis)
  • Loblloly Pine (Pinus taeda)
  • Malaria Parasite (Plasmodium falciparum)
  • Medicago Trunc (Medicago Truncatula)
  • Moss (Physcomitrella patens)
  • Mouse (Mus musculus)
  • Orangutan (Pongo pygmaeus)
  • Pig (Sus scrofa)
  • Rainbow Trout (Oncorhynchus mykiss)
  • Rat (Rattus norvegicus)
  • Rice (Oryza sativa)
  • Rice Blast Fungus (Magnaporthe grisea)
  • Schistosome Parasite (Schistosoma mansoni)
  • Sea Anemone (Nematostella vectensis)
  • Sea Vase (Ciona intestinalis)
  • Sea Squirt (Ciona savignyi)
  • Sea Urchin (Strongylocentrotus purpuratus)
  • Sorghum (Sorghum bicolor)
  • Soybean (Glycine max)
  • Stem Rust Fungus (Puccinia graminis)
  • Sugarcane (Saccharum officinarum)
  • Thale Cress (Arabidopsis thaliana)
  • Tomato (Lycopersicon esculentum)
  • Toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • Tropical Clawed Frog (Silurana tropicalis)
  • Wheat (Triticum aestivum)
  • Worm (Caenorhabditis elegans)

Evolution for ENSG00000202440 Gene

Gene Tree for ENSG00000202440 (if available)
Gene Tree for ENSG00000202440 (if available)

Paralogs for ENSG00000202440 Gene

No data available for Paralogs for ENSG00000202440 Gene

Variants for ENSG00000202440 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000202440 Gene

Disorders for ENSG00000202440 Gene

No disorders were found for ENSG00000202440 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000202440 Gene

Publications for ENSG00000202440 Gene

No publications were found for ENSG00000202440 Gene.

No data available for Mastermind for ENSG00000202440 Gene

Products for ENSG00000202440 Gene

Sources for ENSG00000202440 Gene