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ENSG00000201627 Gene(RNA Gene)

 

GCID:
GC08M105929
GIFtS:
7
Genes Participants
UDN Logo

Aliases for ENSG00000201627 Gene

Subcategory (RNA class) for ENSG00000201627 Gene

Y RNA

Quality Score for this RNA gene is

13

Aliases for ENSG00000201627 Gene

  • RF00019 5

External Ids for ENSG00000201627 Gene

ORGUL Members for ENSG00000201627 Gene

Previous GeneCards Identifiers for ENSG00000201627 Gene

  • GC08M107011

Summaries for ENSG00000201627 Gene

GeneCards Summary for ENSG00000201627 Gene

ENSG00000201627 is an RNA Gene, and is affiliated with the Y RNA class.

Additional gene information for ENSG00000201627 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ENSG00000201627 Gene

Genomics for ENSG00000201627 Gene

Products:

  1. Regulatory Element

GeneHancer (GH) Regulatory Elements for ENSG00000201627 Gene

Promoters and enhancers for ENSG00000201627 Gene
GeneHancer (GH) Identifier GH Type GH
Score		 GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites		 Gene Targets
GH08J106010 Enhancer 0.8 Ensembl ENCODE 0.2 -82.4 -82384 1.6 SMARCE1 MAFG BACH1 DPF2 JUND ZNF316 NFE2 FOS MAFK EMSY ZFPM2-AS1 ENSG00000201627 GC08M105930
GH08J105908 Enhancer 0.5 ENCODE 0.3 +20.8 20810 0.1 CTCF ZNF654 ZNF143 ZNF444 RAD21 GC08P105903 GC08M105930 ENSG00000201627 ZFPM2-AS1
GH08J106058 Enhancer 1.4 Ensembl ENCODE dbSUPER 0.1 -131.0 -130969 3.5 SMAD1 SIN3A POLR2B FOS SP3 REST ZNF592 SREBF1 SMARCA4 GLIS1 ZFPM2-AS1 GC08M106059 GC08M105930 ENSG00000201627
GH08J106044 Enhancer 1.3 FANTOM5 ENCODE dbSUPER 0.1 -117.5 -117469 3.7 PKNOX1 FOXA2 FEZF1 ZNF2 FOS SP3 TSHZ1 ZNF518A MAFF SMARCA4 ZFPM2-AS1 GC08M105930 ENSG00000201627
GH08J105989 Enhancer 0.6 ENCODE 0.2 -60.7 -60692 1 PKNOX1 NANOG ZNF384 FEZF1 PRDM6 FOXK2 POU5F1 TCF7L2 ENSG00000201627 GC08M105930 ZFPM2-AS1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000201627 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000201627 Gene

Genomic Locations for ENSG00000201627 Gene
chr8:105,929,126-105,929,238
(GRCh38/hg38)
Size:
113 bases
Orientation:
Minus strand
chr8:106,941,354-106,941,466
(GRCh37/hg19)
Size:
113 bases
Orientation:
Minus strand

Genomic View for ENSG00000201627 Gene

Genes around ENSG00000201627 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000201627 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000201627 Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

No data available for RefSeq DNA sequence for ENSG00000201627 Gene

Proteins for ENSG00000201627 Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

Post-translational modifications for ENSG00000201627 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000201627 Gene

Domains & Families for ENSG00000201627 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ENSG00000201627 Gene

Function for ENSG00000201627 Gene

Products:

  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line

Phenotypes From GWAS Catalog for ENSG00000201627 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000201627 Gene

Localization for ENSG00000201627 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000201627 Gene

Pathways & Interactions for ENSG00000201627 Gene

SuperPathways for ENSG00000201627 Gene

PathCards logo More details on SuperPathways for ENSG00000201627
No Data Available

Interacting Proteins for ENSG00000201627 Gene

Gene Ontology (GO) - Biological Process for ENSG00000201627 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ENSG00000201627 Gene

Drugs & Compounds for ENSG00000201627 Gene

Products:

  1. Drug
No Compound Related Data Available

Transcripts for ENSG00000201627 Gene

Products:

  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone

mRNA/cDNA for ENSG00000201627 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000201627 Gene

No ASD Table

Relevant External Links for ENSG00000201627 Gene

GeneLoc Exon Structure for
ENSG00000201627

Expression for ENSG00000201627 Gene

Products:

  1. Primer

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ENSG00000201627 Gene

mRNA expression in normal human tissues for ENSG00000201627 Gene
mRNA expression by GTEx for ENSG00000201627 Gene
genes like me logo Genes that share expression patterns with ENSG00000201627: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000201627 Gene

Orthologs for ENSG00000201627 Gene

This gene was present in the common ancestor of mammals.

Orthologs for ENSG00000201627 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
 Mammalia Y_RNA 34
  • 99 (a)
 OneToOne
dog
(Canis familiaris)
 Mammalia Y_RNA 34
  • 82 (a)
 OneToMany
Species where no ortholog for ENSG00000201627 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for ENSG00000201627 Gene

ENSEMBL:
Gene Tree for ENSG00000201627 (if available)
TreeFam:
Gene Tree for ENSG00000201627 (if available)

Paralogs for ENSG00000201627 Gene

No data available for Paralogs for ENSG00000201627 Gene

Variants for ENSG00000201627 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000201627 Gene

Disorders for ENSG00000201627 Gene

No disorders were found for ENSG00000201627 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000201627 Gene

Publications for ENSG00000201627 Gene

No publications were found for ENSG00000201627 Gene.

Products for ENSG00000201627 Gene

Sources for ENSG00000201627 Gene

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