Aliases for ENSG00000201407 Gene

Subcategory (RNA class) for ENSG00000201407 Gene

snoRNA

Number of RNA Genes sources:

3 / 17

Aliases for ENSG00000201407 Gene

  • AC079169.1 5
  • SNORA68L3 170
  • SNODB299 177
  • RF00263 168

External Ids for ENSG00000201407 Gene

Previous GeneCards Identifiers for ENSG00000201407 Gene

  • GC0XP023910
  • GC0XP024061
  • GC0XP024151

Summaries for ENSG00000201407 Gene

GeneCards Summary for ENSG00000201407 Gene

ENSG00000201407 is an RNA Gene, and is affiliated with the snoRNA class.

Rfam classification for ENSG00000201407 Gene

  • Small nucleolar RNA SNORA68

Additional gene information for ENSG00000201407 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for ENSG00000201407 Gene

Genomics for ENSG00000201407 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for ENSG00000201407 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH0XJ024133 Promoter 0.7 EPDnew 600.7 +0.4 421 0.1 ZNF600 SMARCC1 CEBPB CHD2 DEK MXI1 POLR2A RAD21 RFX5 SMC3 ENSG00000201407 FJ601678-188 piR-43105-694 ZFX EIF2S3 RF00017-8239 RF00017-8237
GH0XJ024183 Enhancer 1.1 Ensembl ENCODE 12.6 +60.3 60315 25.4 GATAD2A ATF7 TFE3 SOX13 NFKBIZ RCOR2 JUND PRDM1 RBFOX2 RXRB ZFX ZFX-AS1 ENSG00000201407 KLHL15 FJ601678-189 RF00017-8242 KX404986 RF00017-8239 RF00017-8237 SUPT20HL2
GH0XJ024242 Enhancer 0.8 ENCODE 12.4 +110.8 110811 3.6 CTCF PRDM10 ZIC2 REST RAD21 IKZF2 TRIM22 POLR2A ZNF341 SP1 ZFX ZFX-AS1 ENSG00000201407 KLHL15 RF00017-8243 RF00017-8239 RF00017-8237 SUPT20HL2
GH0XJ024090 Enhancer 0.4 Ensembl 13.4 -42.2 -42185 0.4 GATA3 TCF7L2 ZFX NR3C1 ENSG00000201407 piR-42491-241 RF00017-8238 RF00017-8229 EIF2S3 ZFX RF00017-8237
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000201407 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for ENSG00000201407 Gene

Genomic Locations for ENSG00000201407 Gene
chrX:24,133,186-24,133,317
(GRCh38/hg38)
Size:
132 bases
Orientation:
Plus strand
chrX:24,151,303-24,151,434
(GRCh37/hg19)
Size:
132 bases
Orientation:
Plus strand

Genomic View for ENSG00000201407 Gene

Genes around ENSG00000201407 on UCSC Golden Path with GeneCards custom track
ENSG00000201407 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
ENSG00000201407 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000201407 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000201407 Gene

Proteins for ENSG00000201407 Gene

Post-translational modifications for ENSG00000201407 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000201407 Gene

Domains & Families for ENSG00000201407 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000201407 Gene

Function for ENSG00000201407 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000201407 Gene

Localization for ENSG00000201407 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000201407 Gene

Pathways & Interactions for ENSG00000201407 Gene

PathCards logo

SuperPathways for ENSG00000201407 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ENSG00000201407 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000201407 Gene

Drugs & Compounds for ENSG00000201407 Gene

No Compound Related Data Available

Transcripts for ENSG00000201407 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for ENSG00000201407 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS000063108C_9606 snoRNA 132 4

Ensembl: ENST00000364537 (view in UCSC) ,

Rfam: RF00263,

snoDB: SNODB299,

snOPY: Homo_sapiens300423,

ENSG00000201407 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000201407 Gene

No ASD Table

Relevant External Links for ENSG00000201407 Gene

GeneLoc Exon Structure for
ENSG00000201407

No data available for mRNA/cDNA for ENSG00000201407 Gene

Expression for ENSG00000201407 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ENSG00000201407 Gene

genes like me logo Genes that share expression patterns with ENSG00000201407: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000201407 Gene

Orthologs for ENSG00000201407 Gene

This gene was present in the common ancestor of chordates.

Orthologs for ENSG00000201407 Gene

Organism Taxonomy Gene Similarity Type Details
Dog
(Canis familiaris)
Mammalia SNORA68 31
  • 78 (a)
OneToMany
Cow
(Bos Taurus)
Mammalia SNORA68 31
  • 76 (a)
ManyToMany
Mouse
(Mus musculus)
Mammalia Gm22331 31
  • 62 (a)
ManyToMany
Oppossum
(Monodelphis domestica)
Mammalia SNORA68 31 31 31
  • 58 (a)
ManyToMany
Platypus
(Ornithorhynchus anatinus)
Mammalia SNORA68 31 31
  • 57 (a)
ManyToMany
Chicken
(Gallus gallus)
Aves SNORA68 31
  • 58 (a)
OneToMany
Lizard
(Anolis carolinensis)
Reptilia SNORA68 31
  • 55 (a)
OneToMany
Zebrafish
(Danio rerio)
Actinopterygii SNORA68 31 31
  • 56 (a)
ManyToMany
Species where no ortholog for ENSG00000201407 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Eremothecium gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • Alpha proteobacteria (Wolbachia pipientis)
  • Amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • Baker's yeast (Saccharomyces cerevisiae)
  • Barley (Hordeum vulgare)
  • Beta proteobacteria (Neisseria meningitidis)
  • Bread mold (Neurospora crassa)
  • Chimpanzee (Pan troglodytes)
  • Chromalveolata (Phytophthora infestans)
  • Common water flea (Daphnia pulex)
  • Corn (Zea mays)
  • E. coli (Escherichia coli)
  • Filamentous fungi (Aspergillus nidulans)
  • Firmicute Bacteria (Streptococcus pneumoniae)
  • Fission Yeast (Schizosaccharomyces pombe)
  • Fruit Fly (Drosophila melanogaster)
  • Green Algae (Chlamydomonas reinhardtii)
  • Honey Bee (Apis mellifera)
  • K. Lactis Yeast (Kluyveromyces lactis)
  • Loblloly Pine (Pinus taeda)
  • Malaria Parasite (Plasmodium falciparum)
  • Medicago Trunc (Medicago Truncatula)
  • Moss (Physcomitrella patens)
  • Orangutan (Pongo pygmaeus)
  • Pig (Sus scrofa)
  • Rainbow Trout (Oncorhynchus mykiss)
  • Rat (Rattus norvegicus)
  • Rice (Oryza sativa)
  • Rice Blast Fungus (Magnaporthe grisea)
  • Schistosome Parasite (Schistosoma mansoni)
  • Sea Anemone (Nematostella vectensis)
  • Sea Vase (Ciona intestinalis)
  • Sea Squirt (Ciona savignyi)
  • Sea Urchin (Strongylocentrotus purpuratus)
  • Sorghum (Sorghum bicolor)
  • Soybean (Glycine max)
  • Stem Rust Fungus (Puccinia graminis)
  • Sugarcane (Saccharum officinarum)
  • Thale Cress (Arabidopsis thaliana)
  • Tomato (Lycopersicon esculentum)
  • Toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • Tropical Clawed Frog (Silurana tropicalis)
  • Wheat (Triticum aestivum)
  • Worm (Caenorhabditis elegans)

Evolution for ENSG00000201407 Gene

ENSEMBL:
Gene Tree for ENSG00000201407 (if available)
TreeFam:
Gene Tree for ENSG00000201407 (if available)

Paralogs for ENSG00000201407 Gene

No data available for Paralogs for ENSG00000201407 Gene

Variants for ENSG00000201407 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000201407 Gene

Disorders for ENSG00000201407 Gene

No disorders were found for ENSG00000201407 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000201407 Gene

Publications for ENSG00000201407 Gene

No publications were found for ENSG00000201407 Gene.

No data available for Mastermind for ENSG00000201407 Gene

Products for ENSG00000201407 Gene

Sources for ENSG00000201407 Gene