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Aliases for ENSG00000201036 Gene

Subcategory (RNA class) for ENSG00000201036 Gene

snoRNA

Quality Score for this RNA gene is

15

Aliases for ENSG00000201036 Gene

  • RF00181 5

External Ids for ENSG00000201036 Gene

ORGUL Members for ENSG00000201036 Gene

Previous GeneCards Identifiers for ENSG00000201036 Gene

  • GC14P100515
  • GC14P101445
  • GC14P101187
  • GC14P101389
  • GC14P102065
  • GC14P102306
  • GC14P102479
  • GC14P102647
  • GC14P102820
  • GC14P102996

Summaries for ENSG00000201036 Gene

GeneCards Summary for ENSG00000201036 Gene

ENSG00000201036 is an RNA Gene, and is affiliated with the snoRNA class.

fRNAdb sequence ontologies for ENSG00000201036 Gene - the ORGUL cluster for this gene includes several descriptions:

  • C_D_box_snoRNA: Most box C/D snoRNAs also contain long (>10 nt) sequences complementary to rRNA. Boxes C and D, as well as boxes C' and D', are usually located in close proximity, and form a structure known as the box C/D motif. This motif is important for snoRNA stability, processing, nucleolar targeting and function. A small number of box C/D snoRNAs are involved in rRNA processing; most, however, are known or predicted to serve as guide RNAs in ribose methylation of rRNA. Targeting involves direct base pairing of the snoRNA at the rRNA site to be modified and selection of a rRNA nucleotide a fixed distance from box D or D'.

  • Small nucleolar RNA SNORD113/SNORD114 family: The imprinted human domain at 14q32 contains two clusters of tandemly repeated small nucleolar RNAs named 14q(I) and 14q(II) snoRNAs. These two clusters are named SNORD113 and SNORD114 respectively in the HGNC approved gene symbol nomenclature. The snoRNAs found in both clusters are clearly related and are represented here by a single family. These snoRNAs are intron encoded and are processed from the tissue-specific non-coding human MEG8 RNA, which lies downstream of the imprinted genes DLK1 and GTL2. snoRNAs 14q(I) and 14q(II) differ from previously identified C/D box snoRNAs in their expression profiles and lack of complementarity to rRNA and snRNA. Homologues of these snoRNAs are found in the imprinted non-coding mouse transcript Rian, and in the rat non-coding Bsr (brain-specific repetitive) RNA.

View fRNAdb secondary structures for ENSG00000201036

Additional gene information for ENSG00000201036 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for ENSG00000201036 Gene

Genomics for ENSG00000201036 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000201036 Gene

Promoters and enhancers for ENSG00000201036 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH14J100979 Enhancer 0.5 ENCODE 650.7 +1.0 957 0.2 JUND JUN NFYB FOSL2 FOS ENSG00000201036 ENSG00000201710 SNORD114-20 GC14P103415 GC14P103378 MEG8
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around ENSG00000201036 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000201036 Gene

Genomic Locations for ENSG00000201036 Gene
chr14:100,979,002-100,979,090
(GRCh38/hg38)
Size:
89 bases
Orientation:
Plus strand
chr14:101,445,339-101,445,427
(GRCh37/hg19)

Genomic View for ENSG00000201036 Gene

Genes around ENSG00000201036 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000201036 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000201036 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for ENSG00000201036 Gene

ORGUL Member Location for ENSG00000201036 gene

No data available for RefSeq DNA sequence for ENSG00000201036 Gene

Proteins for ENSG00000201036 Gene

Post-translational modifications for ENSG00000201036 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000201036 Gene

Domains & Families for ENSG00000201036 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ENSG00000201036 Gene

Function for ENSG00000201036 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000201036 Gene

Localization for ENSG00000201036 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000201036 Gene

Pathways & Interactions for ENSG00000201036 Gene

SuperPathways for ENSG00000201036 Gene

No Data Available

Interacting Proteins for ENSG00000201036 Gene

Gene Ontology (GO) - Biological Process for ENSG00000201036 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ENSG00000201036 Gene

Drugs & Compounds for ENSG00000201036 Gene

No Compound Related Data Available

Transcripts for ENSG00000201036 Gene

fRNAdb Secondary structures for ENSG00000201036 Gene

  • RF00181;SNORD113;AADB02016115.1/108215-108303

mRNA/cDNA for ENSG00000201036 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000201036 Gene

No ASD Table

Relevant External Links for ENSG00000201036 Gene

GeneLoc Exon Structure for
ENSG00000201036

Expression for ENSG00000201036 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ENSG00000201036 Gene

genes like me logo Genes that share expression patterns with ENSG00000201036: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000201036 Gene

Orthologs for ENSG00000201036 Gene

This gene was present in the common ancestor of mammals.

Orthologs for ENSG00000201036 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia SNORD113 34
  • 99 (a)
OneToOne
dog
(Canis familiaris)
Mammalia SNORD113 34 34 34
  • 71 (a)
OneToMany
cow
(Bos Taurus)
Mammalia SNORD113 34 34
  • 69 (a)
OneToMany
mouse
(Mus musculus)
Mammalia DQ267100 34
  • 65 (a)
ManyToMany
Species where no ortholog for ENSG00000201036 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for ENSG00000201036 Gene

ENSEMBL:
Gene Tree for ENSG00000201036 (if available)
TreeFam:
Gene Tree for ENSG00000201036 (if available)

Paralogs for ENSG00000201036 Gene

No data available for Paralogs for ENSG00000201036 Gene

Variants for ENSG00000201036 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000201036 Gene

Disorders for ENSG00000201036 Gene

No disorders were found for ENSG00000201036 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000201036 Gene

Publications for ENSG00000201036 Gene

  1. Identification of tandemly-repeated C/D snoRNA genes at the imprinted human 14q32 domain reminiscent of those at the Prader-Willi/Angelman syndrome region. (PMID: 12045206) Cavaillé J … Bachellerie JP (Human molecular genetics 2002) 1

Products for ENSG00000201036 Gene

Sources for ENSG00000201036 Gene

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