Aliases for ENSG00000200897 Gene

Subcategory (RNA class) for ENSG00000200897 Gene

snoRNA

Number of RNA Genes sources:

3 / 17

Aliases for ENSG00000200897 Gene

  • AC009774.1 5
  • SNODB2009 177
  • SNORD74L1 170
  • SNODB2020 177
  • SNODB1260 177
  • RF00284 168

External Ids for ENSG00000200897 Gene

Previous GeneCards Identifiers for ENSG00000200897 Gene

  • GC12P106270
  • GC12P107768

Summaries for ENSG00000200897 Gene

GeneCards Summary for ENSG00000200897 Gene

ENSG00000200897 is an RNA Gene, and is affiliated with the snoRNA class.

Rfam classification for ENSG00000200897 Gene

  • Small nucleolar RNA SNORD74

Additional gene information for ENSG00000200897 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for ENSG00000200897 Gene

Genomics for ENSG00000200897 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for ENSG00000200897 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH12J107371 Promoter/Enhancer 0.8 Ensembl ENCODE 600.7 -1.4 -1405 3.6 ZBTB17 SPI1 RCOR1 CHD2 GATA2 ENSG00000200897 lnc-PWP1-3 BTBD11 PWP1
GH12J107317 Promoter/Enhancer 1.6 Ensembl ENCODE CraniofacialAtlas 11.3 -54.7 -54746 5.2 CTCF PRDM10 ZNF629 PRDM1 ZIC2 ZSCAN4 RBFOX2 POLR2A PATZ1 REST ENSG00000200897 BTBD11 lnc-PWP1-3 PWP1
GH12J107328 Enhancer 1.1 FANTOM5 Ensembl ENCODE 11.6 -44.8 -44846 7 PRDM10 ZNF629 KDM1A PRDM1 ZIC2 PKNOX1 SCRT2 CEBPB SP1 TSHZ1 ENSG00000200897 BTBD11 lnc-PWP1-3 PWP1
GH12J107514 Enhancer 1 Ensembl ENCODE 9.8 +140.8 140754 2.6 CREB1 GATAD2A PRDM10 ZNF629 RFX1 PRDM1 REST ZNF600 CEBPA SOX13 PWP1 CRY1 PRDM4 ENSG00000200897 BTBD11 RNA5SP371 RF00001-087 piR-45035-047
GH12J107131 Enhancer 0.8 Ensembl ENCODE 11 -242.7 -242681 0.7 CTCF REST RAD21 TRIM22 ZNF600 ZNF639 SMC3 ZBTB17 RFX5 GATA3 ENSG00000200897 piR-47675-025 CRY1 piR-38599-011 BTBD11
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000200897 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for ENSG00000200897 Gene

Genomic Locations for ENSG00000200897 Gene
chr12:107,374,747-107,374,829
(GRCh38/hg38)
Size:
83 bases
Orientation:
Plus strand
chr12:107,768,524-107,768,604
(GRCh37/hg19)
Size:
81 bases
Orientation:
Plus strand

Genomic View for ENSG00000200897 Gene

Genes around ENSG00000200897 on UCSC Golden Path with GeneCards custom track
ENSG00000200897 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
ENSG00000200897 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000200897 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000200897 Gene

Proteins for ENSG00000200897 Gene

Post-translational modifications for ENSG00000200897 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000200897 Gene

Domains & Families for ENSG00000200897 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000200897 Gene

Function for ENSG00000200897 Gene

Phenotypes From GWAS Catalog for ENSG00000200897 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000200897 Gene

Localization for ENSG00000200897 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000200897 Gene

Pathways & Interactions for ENSG00000200897 Gene

PathCards logo

SuperPathways for ENSG00000200897 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ENSG00000200897 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000200897 Gene

Drugs & Compounds for ENSG00000200897 Gene

No Compound Related Data Available

Transcripts for ENSG00000200897 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for ENSG00000200897 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS0000AAC370_9606 snoRNA 81 2

Ensembl: ENST00000364027 (view in UCSC) ,

snoDB: SNODB2020,

URS000072668C_9606 snoRNA 79 2

Rfam: RF00284,

snoDB: SNODB1260,

URS000083467D_9606 snoRNA 75 2

snoDB: SNODB2009,

snOPY: Homo_sapiens300694,

ENSG00000200897 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000200897 Gene

No ASD Table

Relevant External Links for ENSG00000200897 Gene

GeneLoc Exon Structure for
ENSG00000200897

No data available for mRNA/cDNA for ENSG00000200897 Gene

Expression for ENSG00000200897 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ENSG00000200897 Gene

genes like me logo Genes that share expression patterns with ENSG00000200897: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000200897 Gene

Orthologs for ENSG00000200897 Gene

This gene was present in the common ancestor of chordates.

Orthologs for ENSG00000200897 Gene

Organism Taxonomy Gene Similarity Type Details
Chimpanzee
(Pan troglodytes)
Mammalia SNORD74 31
  • 99 (a)
OneToOne
Mouse
(Mus musculus)
Mammalia Gm26224 31
  • 73 (a)
OneToMany
Oppossum
(Monodelphis domestica)
Mammalia SNORD74 31
  • 71 (a)
OneToMany
Platypus
(Ornithorhynchus anatinus)
Mammalia SNORD74 31 31
  • 64 (a)
ManyToMany
Chicken
(Gallus gallus)
Aves SNORD74 31
  • 67 (a)
OneToMany
Lizard
(Anolis carolinensis)
Reptilia SNORD74 31
  • 64 (a)
OneToMany
Zebrafish
(Danio rerio)
Actinopterygii SNORD74 31
  • 64 (a)
OneToMany
Species where no ortholog for ENSG00000200897 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Eremothecium gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • Alpha proteobacteria (Wolbachia pipientis)
  • Amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • Baker's yeast (Saccharomyces cerevisiae)
  • Barley (Hordeum vulgare)
  • Beta proteobacteria (Neisseria meningitidis)
  • Bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • Common water flea (Daphnia pulex)
  • Corn (Zea mays)
  • Cow (Bos Taurus)
  • Dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • Filamentous fungi (Aspergillus nidulans)
  • Firmicute Bacteria (Streptococcus pneumoniae)
  • Fission Yeast (Schizosaccharomyces pombe)
  • Fruit Fly (Drosophila melanogaster)
  • Green Algae (Chlamydomonas reinhardtii)
  • Honey Bee (Apis mellifera)
  • K. Lactis Yeast (Kluyveromyces lactis)
  • Loblloly Pine (Pinus taeda)
  • Malaria Parasite (Plasmodium falciparum)
  • Medicago Trunc (Medicago Truncatula)
  • Moss (Physcomitrella patens)
  • Orangutan (Pongo pygmaeus)
  • Pig (Sus scrofa)
  • Rainbow Trout (Oncorhynchus mykiss)
  • Rat (Rattus norvegicus)
  • Rice (Oryza sativa)
  • Rice Blast Fungus (Magnaporthe grisea)
  • Schistosome Parasite (Schistosoma mansoni)
  • Sea Anemone (Nematostella vectensis)
  • Sea Vase (Ciona intestinalis)
  • Sea Squirt (Ciona savignyi)
  • Sea Urchin (Strongylocentrotus purpuratus)
  • Sorghum (Sorghum bicolor)
  • Soybean (Glycine max)
  • Stem Rust Fungus (Puccinia graminis)
  • Sugarcane (Saccharum officinarum)
  • Thale Cress (Arabidopsis thaliana)
  • Tomato (Lycopersicon esculentum)
  • Toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • Tropical Clawed Frog (Silurana tropicalis)
  • Wheat (Triticum aestivum)
  • Worm (Caenorhabditis elegans)

Evolution for ENSG00000200897 Gene

ENSEMBL:
Gene Tree for ENSG00000200897 (if available)
TreeFam:
Gene Tree for ENSG00000200897 (if available)

Paralogs for ENSG00000200897 Gene

No data available for Paralogs for ENSG00000200897 Gene

Variants for ENSG00000200897 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000200897 Gene

Disorders for ENSG00000200897 Gene

No disorders were found for ENSG00000200897 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000200897 Gene

Publications for ENSG00000200897 Gene

No publications were found for ENSG00000200897 Gene.

No data available for Mastermind for ENSG00000200897 Gene

Products for ENSG00000200897 Gene

Sources for ENSG00000200897 Gene