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Aliases for ENSG00000200652 Gene

Subcategory (RNA class) for ENSG00000200652 Gene

snoRNA

Quality Score for this RNA gene is

13

Aliases for ENSG00000200652 Gene

  • RF00402 5

External Ids for ENSG00000200652 Gene

ORGUL Members for ENSG00000200652 Gene

Previous GeneCards Identifiers for ENSG00000200652 Gene

  • GC16P028097

Summaries for ENSG00000200652 Gene

GeneCards Summary for ENSG00000200652 Gene

ENSG00000200652 is an RNA Gene, and is affiliated with the snoRNA class.

Additional gene information for ENSG00000200652 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ENSG00000200652 Gene

Genomics for ENSG00000200652 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000200652 Gene

Promoters and enhancers for ENSG00000200652 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH16J028209 Promoter/Enhancer 2.3 EPDnew Ensembl ENCODE dbSUPER 11.4 +32.5 32504 3.5 CLOCK MLX FEZF1 DMAP1 IRF4 YY1 SLC30A9 ZNF143 ZNF548 SP3 XPO6 SH2B1 ATXN2L ENSG00000261766 NPIPB9 ENSG00000260853 SPNS1 NFATC2IP ENSG00000260367 RPS15AP33
GH16J028138 Enhancer 1.6 FANTOM5 Ensembl ENCODE dbSUPER 12.3 -37.8 -37818 5.6 HDGF PKNOX1 ATF1 SMAD1 BMI1 IRF4 RAD21 YY1 ZNF121 ZFP91 XPO6 APOBR ATXN2L NFATC2IP SPNS1 ENSG00000260853 ENSG00000260367 ENSG00000200652 RNY1P10 SGF29
GH16J028148 Enhancer 1 FANTOM5 ENCODE dbSUPER 12.3 -29.4 -29432 2 HLF CEBPB ATF2 CEBPA ZNF629 CREB1 PRDM10 ZNF600 ATF7 XPO6 APOBR ENSG00000200652 RNY1P10 GSG1L SBK1 ENSG00000246465 SULT1A1 GC16P028181 TPRKBP2
GH16J028145 Enhancer 0.9 Ensembl ENCODE dbSUPER 12.2 -32.8 -32751 1.9 NR2F1 IKZF1 TRIM22 ATF7 BMI1 DPF2 IKZF2 ENSG00000200652 RNY1P10 SBK1 ENSG00000246465 XPO6 TPRKBP2 GC16P028181
GH16J028124 Enhancer 0.8 dbSUPER 11.3 -53.6 -53583 2.1 HDAC1 ARNT TCF12 SCRT2 ATF7 RXRA CEBPB NCOA1 ATF4 NFIC ENSG00000200652 RNY1P10 XPO6 TPRKBP2 GC16P028181
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around ENSG00000200652 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000200652 Gene

Genomic Locations for ENSG00000200652 Gene
chr16:28,179,098-28,179,223
(GRCh38/hg38)
Size:
126 bases
Orientation:
Plus strand
chr16:28,190,419-28,190,544
(GRCh37/hg19)

Genomic View for ENSG00000200652 Gene

Genes around ENSG00000200652 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000200652 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000200652 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000200652 Gene

Proteins for ENSG00000200652 Gene

Post-translational modifications for ENSG00000200652 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000200652 Gene

Domains & Families for ENSG00000200652 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ENSG00000200652 Gene

Function for ENSG00000200652 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000200652 Gene

Localization for ENSG00000200652 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000200652 Gene

Pathways & Interactions for ENSG00000200652 Gene

SuperPathways for ENSG00000200652 Gene

No Data Available

Interacting Proteins for ENSG00000200652 Gene

Gene Ontology (GO) - Biological Process for ENSG00000200652 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ENSG00000200652 Gene

Drugs & Compounds for ENSG00000200652 Gene

No Compound Related Data Available

Transcripts for ENSG00000200652 Gene

mRNA/cDNA for ENSG00000200652 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000200652 Gene

No ASD Table

Relevant External Links for ENSG00000200652 Gene

GeneLoc Exon Structure for
ENSG00000200652

Expression for ENSG00000200652 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ENSG00000200652 Gene

genes like me logo Genes that share expression patterns with ENSG00000200652: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000200652 Gene

Orthologs for ENSG00000200652 Gene

This gene was present in the common ancestor of chordates.

Orthologs for ENSG00000200652 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia SNORA25 34
  • 98 (a)
OneToOne
cow
(Bos Taurus)
Mammalia SNORA25 34
  • 73 (a)
ManyToMany
dog
(Canis familiaris)
Mammalia SNORA25 34
  • 72 (a)
OneToMany
oppossum
(Monodelphis domestica)
Mammalia SNORA25 34
  • 66 (a)
OneToMany
mouse
(Mus musculus)
Mammalia Gm23584 34
  • 60 (a)
ManyToMany
chicken
(Gallus gallus)
Aves SNORA25 34
  • 61 (a)
OneToMany
lizard
(Anolis carolinensis)
Reptilia SNORA25 34
  • 62 (a)
OneToMany
Species where no ortholog for ENSG00000200652 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for ENSG00000200652 Gene

ENSEMBL:
Gene Tree for ENSG00000200652 (if available)
TreeFam:
Gene Tree for ENSG00000200652 (if available)

Paralogs for ENSG00000200652 Gene

No data available for Paralogs for ENSG00000200652 Gene

Variants for ENSG00000200652 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000200652 Gene

Disorders for ENSG00000200652 Gene

No disorders were found for ENSG00000200652 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000200652 Gene

Publications for ENSG00000200652 Gene

No publications were found for ENSG00000200652 Gene.

Products for ENSG00000200652 Gene

Sources for ENSG00000200652 Gene

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