Aliases for ENSG00000199959 Gene

Subcategory (RNA class) for ENSG00000199959 Gene

snoRNA

Quality Score for this RNA gene is

13

Aliases for ENSG00000199959 Gene

External Ids for ENSG00000199959 Gene

Previous GeneCards Identifiers for ENSG00000199959 Gene

  • GC01P084456
  • GC01P084515
  • GC01P084743

Summaries for ENSG00000199959 Gene

GeneCards Summary for ENSG00000199959 Gene

ENSG00000199959 is an RNA Gene, and is affiliated with the snoRNA class.

Rfam classification for ENSG00000199959 Gene

  • Small nucleolar RNA SNORA2/SNORA34 family

Additional gene information for ENSG00000199959 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for ENSG00000199959 Gene

Genomics for ENSG00000199959 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000199959 Gene

Promoters and enhancers for ENSG00000199959 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J084278 Enhancer 0.7 FANTOM5 750.6 +1.7 1740 0.4 SMARCE1 ELF1 TEAD4 SP1 TRIM24 MTA1 HDAC1 EP300 SOX6 MTA3 ENSG00000199959 SAMD13 PRKACB piR-55284-001 lnc-GNG5-9
GH01J084244 Promoter/Enhancer 1.4 FANTOM5 Ensembl ENCODE 11.4 -30.8 -30822 4.6 SMARCE1 TEAD4 ZBTB33 MAFK CTCF CBFA2T2 SP7 SMARCA4 CREM ZNF639 ENSG00000199959 ENSG00000226970 LOC100128775 lnc-PRKACB-5 SAMD13
GH01J084374 Enhancer 1 FANTOM5 Ensembl ENCODE dbSUPER 10.3 +100.5 100504 6 ATF7 FOS ZNF366 JUND ATF2 CBFA2T3 DNASE2B UOX ENSG00000199959 RPF1 SSX2IP SAMD13 GNG5 ENSG00000249237 NONHSAG001946.2 lnc-GNG5-1
GH01J084405 Promoter/Enhancer 1 EPDnew ENCODE 9.8 +129.6 129633 3.2 RAD21 NFIB SP1 IKZF1 FOXA2 POLR2A MNT NFE2 JUND MAFG DNASE2B SAMD13 ENSG00000199959 piR-60885-004 lnc-GNG5-1
GH01J084386 Enhancer 0.8 Ensembl dbSUPER 9.8 +111.7 111705 4 RELA CREM IKZF1 RFX1 REST BACH1 IKZF2 CTCF DPF2 BMI1 ENSG00000199959 UOX NONHSAG001946.2 ENSG00000249237 lnc-GNG5-1 SAMD13
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000199959 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000199959 Gene

Genomic Locations for ENSG00000199959 Gene
chr1:84,277,321-84,277,457
(GRCh38/hg38)
Size:
137 bases
Orientation:
Plus strand
chr1:84,743,004-84,743,140
(GRCh37/hg19)
Size:
137 bases
Orientation:
Plus strand

Genomic View for ENSG00000199959 Gene

Genes around ENSG00000199959 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000199959 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000199959 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000199959 Gene

Proteins for ENSG00000199959 Gene

Post-translational modifications for ENSG00000199959 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000199959 Gene

Domains & Families for ENSG00000199959 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000199959 Gene

Function for ENSG00000199959 Gene

Phenotypes From GWAS Catalog for ENSG00000199959 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000199959 Gene

Localization for ENSG00000199959 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000199959 Gene

Pathways & Interactions for ENSG00000199959 Gene

PathCards logo

SuperPathways for ENSG00000199959 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ENSG00000199959 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ENSG00000199959 Gene

Drugs & Compounds for ENSG00000199959 Gene

No Compound Related Data Available

Transcripts for ENSG00000199959 Gene

mRNA/cDNA for ENSG00000199959 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
(1) RNACentral transcripts :
(1) Rfam transcripts :
(1) snOPY transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000199959 Gene

No ASD Table

Relevant External Links for ENSG00000199959 Gene

GeneLoc Exon Structure for
ENSG00000199959

Expression for ENSG00000199959 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ENSG00000199959 Gene

genes like me logo Genes that share expression patterns with ENSG00000199959: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000199959 Gene

Orthologs for ENSG00000199959 Gene

This gene was present in the common ancestor of chordates.

Orthologs for ENSG00000199959 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia SNORA2 33
  • 99 (a)
OneToOne
dog
(Canis familiaris)
Mammalia SNORA2 33
  • 89 (a)
OneToMany
cow
(Bos Taurus)
Mammalia SNORA2 33 33 33 33 33
  • 88 (a)
ManyToMany
mouse
(Mus musculus)
Mammalia Gm22806 33
  • 82 (a)
ManyToMany
Gm25896 33
  • 81 (a)
ManyToMany
Gm22804 33
  • 81 (a)
ManyToMany
Gm24166 33
  • 79 (a)
ManyToMany
Gm22299 33
  • 75 (a)
ManyToMany
Gm24406 33
  • 67 (a)
ManyToMany
oppossum
(Monodelphis domestica)
Mammalia SNORA2 33
  • 74 (a)
OneToMany
platypus
(Ornithorhynchus anatinus)
Mammalia SNORA2 33
  • 61 (a)
OneToMany
chicken
(Gallus gallus)
Aves SNORA2 33
  • 53 (a)
OneToMany
lizard
(Anolis carolinensis)
Reptilia SNORA2 33
  • 66 (a)
OneToMany
zebrafish
(Danio rerio)
Actinopterygii SNORA2 33
  • 63 (a)
OneToMany
Species where no ortholog for ENSG00000199959 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for ENSG00000199959 Gene

ENSEMBL:
Gene Tree for ENSG00000199959 (if available)
TreeFam:
Gene Tree for ENSG00000199959 (if available)

Paralogs for ENSG00000199959 Gene

No data available for Paralogs for ENSG00000199959 Gene

Variants for ENSG00000199959 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000199959 Gene

Disorders for ENSG00000199959 Gene

No disorders were found for ENSG00000199959 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000199959 Gene

Publications for ENSG00000199959 Gene

No publications were found for ENSG00000199959 Gene.

No data available for External Links for ENSG00000199959 Gene

Products for ENSG00000199959 Gene

Sources for ENSG00000199959 Gene