ENSG00000199713 Gene (RNA Gene)

 

GC18M058818
GIFtS:
6

Aliases for ENSG00000199713 Gene

Subcategory (RNA class) for ENSG00000199713 Gene

snoRNA

Quality Score for this RNA gene is

13

Aliases for ENSG00000199713 Gene

External Ids for ENSG00000199713 Gene

Previous GeneCards Identifiers for ENSG00000199713 Gene

  • GC18M054638
  • GC18M056486

Summaries for ENSG00000199713 Gene

GeneCards Summary for ENSG00000199713 Gene

ENSG00000199713 is an RNA Gene, and is affiliated with the snoRNA class.

Rfam classification for ENSG00000199713 Gene

Additional gene information for ENSG00000199713 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for ENSG00000199713 Gene

Genomics for ENSG00000199713 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000199713 Gene

Promoters and enhancers for ENSG00000199713 Gene
GeneHancer (GH) Identifier GH Type GH
Score		 GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites		 Gene Targets
GH18J058818 Enhancer 0.4 Ensembl 750.6 -0.6 -584 0.8 PKNOX1 CBFB RUNX3 ENSG00000199713 piR-32214-314 LINC01926
GH18J058784 Enhancer 1.4 Ensembl ENCODE CraniofacialAtlas dbSUPER 12.1 +31.1 31113 7.8 SIN3A POLR2A USF2 ZNF362 ZNF133 BCL6B ZBTB33 MAFK SP7 ELF1 lnc-MALT1-3 lnc-MALT1-4 MALT1 ENSG00000199713 ZNF532 piR-48759-146
GH18J058845 Enhancer 1.2 FANTOM5 ENCODE CraniofacialAtlas dbSUPER 12.6 -29.9 -29923 7.4 ZNF121 POU5F1 SP1 BCL6B MAFK CEBPB PKNOX1 POLR2A NFE2 EP300 ENSG00000199713 ZNF532 HSALNG0121835
GH18J058524 Enhancer 1.4 FANTOM5 Ensembl ENCODE dbSUPER 9.9 +291.6 291615 5.6 CTCF LCORL NR2F1 NR2F6 CREB1 MIXL1 ETV6 RAD21 ELF3 POLR2A MALT1 SNORA108 MIR122 MIR3591 ENSG00000199713 ENSG00000267257 NEDD4L ENSG00000274354 ALPK2
GH18J058781 Enhancer 1.2 Ensembl ENCODE dbSUPER 11.5 +37.1 37082 1.1 CTCF LCORL CTBP1 ZNF133 CC2D1A MAX RAD21 SOX6 ZNF280D IKZF1 LOC105372146 piR-48759-146 MALT1 ZNF532 ENSG00000199713 lnc-MALT1-4
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000199713 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000199713 Gene

Genomic Locations for ENSG00000199713 Gene
chr18:58,818,883-58,819,016
(GRCh38/hg38)
Size:
134 bases
Orientation:
Minus strand
chr18:56,486,115-56,486,248
(GRCh37/hg19)
Size:
134 bases
Orientation:
Minus strand

Genomic View for ENSG00000199713 Gene

Genes around ENSG00000199713 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000199713 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000199713 Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

No data available for RefSeq DNA sequence for ENSG00000199713 Gene

Proteins for ENSG00000199713 Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

Post-translational modifications for ENSG00000199713 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000199713 Gene

Domains & Families for ENSG00000199713 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000199713 Gene

Function for ENSG00000199713 Gene

Products:

  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line

Phenotypes From GWAS Catalog for ENSG00000199713 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000199713 Gene

Localization for ENSG00000199713 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000199713 Gene

Pathways & Interactions for ENSG00000199713 Gene

PathCards logo

SuperPathways for ENSG00000199713 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ENSG00000199713 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ENSG00000199713 Gene

Drugs & Compounds for ENSG00000199713 Gene

Products:

  1. Drug
No Compound Related Data Available

Transcripts for ENSG00000199713 Gene

Products:

  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone

mRNA/cDNA for ENSG00000199713 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
(1) RNACentral transcripts :
(1) Rfam transcripts :
(1) snOPY transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000199713 Gene

No ASD Table

Relevant External Links for ENSG00000199713 Gene

GeneLoc Exon Structure for
ENSG00000199713

Expression for ENSG00000199713 Gene

Products:

  1. Primer

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ENSG00000199713 Gene

mRNA expression in normal human tissues for ENSG00000199713 Gene
mRNA expression by GTEx for ENSG00000199713 Gene
genes like me logo Genes that share expression patterns with ENSG00000199713: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000199713 Gene

Orthologs for ENSG00000199713 Gene

This gene was present in the common ancestor of chordates.

Orthologs for ENSG00000199713 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
 Mammalia U8 33
  • 99 (a)
 OneToOne
mouse
(Mus musculus)
 Mammalia Gm25369 33
  • 65 (a)
 OneToMany
oppossum
(Monodelphis domestica)
 Mammalia U8 33
  • 61 (a)
 OneToMany
sea squirt
(Ciona savignyi)
 Ascidiacea U8 33
  • 52 (a)
 OneToMany
Species where no ortholog for ENSG00000199713 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for ENSG00000199713 Gene

ENSEMBL:
Gene Tree for ENSG00000199713 (if available)
TreeFam:
Gene Tree for ENSG00000199713 (if available)

Paralogs for ENSG00000199713 Gene

No data available for Paralogs for ENSG00000199713 Gene

Variants for ENSG00000199713 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000199713 Gene

Disorders for ENSG00000199713 Gene

No disorders were found for ENSG00000199713 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000199713 Gene

Publications for ENSG00000199713 Gene

No publications were found for ENSG00000199713 Gene.

No data available for External Links for ENSG00000199713 Gene

Products for ENSG00000199713 Gene

Sources for ENSG00000199713 Gene