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Aliases for ENSG00000199490 Gene

Subcategory (RNA class) for ENSG00000199490 Gene

Y RNA

Quality Score for this RNA gene is

13

Aliases for ENSG00000199490 Gene

  • RF00019 5

External Ids for ENSG00000199490 Gene

ORGUL Members for ENSG00000199490 Gene

Previous GeneCards Identifiers for ENSG00000199490 Gene

  • GC20M047970
  • GC20M048537

Summaries for ENSG00000199490 Gene

GeneCards Summary for ENSG00000199490 Gene

ENSG00000199490 is an RNA Gene, and is affiliated with the Y RNA class.

Additional gene information for ENSG00000199490 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ENSG00000199490 Gene

Genomics for ENSG00000199490 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000199490 Gene

Promoters and enhancers for ENSG00000199490 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH20J048919 Promoter/Enhancer 2.4 EPDnew Ensembl ENCODE dbSUPER 14.6 +998.2 998198 5.7 MLX ZFP64 FEZF1 DMAP1 YBX1 YY1 SLC30A9 ZNF213 E2F8 ZNF416 ARFGEF2 DDX27 CSE1L ENSG00000228503 ENSG00000199490 LINC01523 ENSG00000234967 PREX1 SLC9A8 SNORD12B
GH20J050186 Promoter/Enhancer 2.3 FANTOM5 Ensembl ENCODE dbSUPER 14.6 -270.6 -270584 10.3 CLOCK MLX ZFP64 YBX1 FEZF1 DMAP1 YY1 SLC30A9 ZNF213 E2F8 CEBPB GC20P050191 CEBPB-AS1 ADNP DDX27 DPM1 ENSG00000232043 MOCS3 PSMD10P1 RNF114
GH20J050635 Enhancer 1.4 Ensembl ENCODE dbSUPER 14.6 -716.4 -716413 3.8 HDGF PKNOX1 ARID4B SIN3A ZBTB7B ZNF766 ZNF207 ZNF143 FOS KLF13 ADNP RPSAP1 ENSG00000199490 ENSG00000232043 ADNP-AS1 DPM1 LOC100506175 RPL36P2 RIPOR3
GH20J049886 Enhancer 1.3 Ensembl ENCODE dbSUPER 12.2 +30.2 30197 8.1 HDGF PKNOX1 FOXA2 ARID4B SIN3A FEZF1 ZNF2 IRF4 GLIS2 E2F8 PIR47638 PIR47085 GC20P049892 SPATA2 RNF114 SLC9A8 DDX27 ENSG00000199490 RNU6-919P ENSG00000232043
GH20J050070 Enhancer 1.4 Ensembl ENCODE dbSUPER 10.8 -150.8 -150812 1.1 HDGF MLX ARID4B SIN3A DMAP1 ZBTB7B SLC30A9 ZNF207 ZNF143 SP3 SNAI1 RNU6-147P RNF114 ENSG00000199490 SPATA2 MIR645 ENSG00000232043 LINC01273 LOC105372655 GC20M050093
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000199490 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000199490 Gene

Genomic Locations for ENSG00000199490 Gene
chr20:49,920,597-49,920,694
(GRCh38/hg38)
Size:
98 bases
Orientation:
Minus strand
chr20:48,537,134-48,537,231
(GRCh37/hg19)
Size:
98 bases
Orientation:
Minus strand

Genomic View for ENSG00000199490 Gene

Genes around ENSG00000199490 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000199490 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000199490 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000199490 Gene

Proteins for ENSG00000199490 Gene

Post-translational modifications for ENSG00000199490 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000199490 Gene

Domains & Families for ENSG00000199490 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ENSG00000199490 Gene

Function for ENSG00000199490 Gene

Phenotypes From GWAS Catalog for ENSG00000199490 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000199490 Gene

Localization for ENSG00000199490 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000199490 Gene

Pathways & Interactions for ENSG00000199490 Gene

SuperPathways for ENSG00000199490 Gene

No Data Available

Interacting Proteins for ENSG00000199490 Gene

Gene Ontology (GO) - Biological Process for ENSG00000199490 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ENSG00000199490 Gene

Drugs & Compounds for ENSG00000199490 Gene

No Compound Related Data Available

Transcripts for ENSG00000199490 Gene

mRNA/cDNA for ENSG00000199490 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000199490 Gene

No ASD Table

Relevant External Links for ENSG00000199490 Gene

GeneLoc Exon Structure for
ENSG00000199490

Expression for ENSG00000199490 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ENSG00000199490 Gene

mRNA differential expression in normal tissues according to GTEx for ENSG00000199490 Gene

This gene is overexpressed in Testis (x53.0).
genes like me logo Genes that share expression patterns with ENSG00000199490: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000199490 Gene

Orthologs for ENSG00000199490 Gene

This gene was present in the common ancestor of human and chimp.

Orthologs for ENSG00000199490 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia Y_RNA 34
  • 99 (a)
OneToOne
Species where no ortholog for ENSG00000199490 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for ENSG00000199490 Gene

ENSEMBL:
Gene Tree for ENSG00000199490 (if available)
TreeFam:
Gene Tree for ENSG00000199490 (if available)

Paralogs for ENSG00000199490 Gene

No data available for Paralogs for ENSG00000199490 Gene

Variants for ENSG00000199490 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000199490 Gene

Disorders for ENSG00000199490 Gene

No disorders were found for ENSG00000199490 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000199490 Gene

Publications for ENSG00000199490 Gene

No publications were found for ENSG00000199490 Gene.

Products for ENSG00000199490 Gene

Sources for ENSG00000199490 Gene

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